| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3611 |
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| Symbol | |
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| ID | 4922397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4308513 |
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| End bp | 4309703 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165233 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001095736 |
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| Protein GI | 127514539 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGAAA GATTATTTAT CCGATTAGGA AGAAGCGCGG AGCAGAGCTG CTCTTGGCTG
GTATGGTCGG AGCAAGAGCA GGAGATCATC GCCTCGGGAG AGCTGAGCGA CGCCCAGGGG
CTGTCGACCC TGACCGAGCG CGCCGGCAAC CGTCCGGTGG ATATTCTGGT GCCCGCCTCA
GCCATTACCC TTACCTCGGT GCAGCTACCG GAGAAGGGCC AGCGTCAGGC GCTCAAGGCC
CTGCCTTTCA TGCTTGAAGA GACCCTGGCC GAGAATGTCG ATGAACTGCA TTTTGTCCCC
GGCCCGCGTA ATGGCGAGTC GCTGAGTGTT GCCGTGGTGG CCCACGAGCA GATGCAGACC
TGGCTCTCTT GGTTGAGCGA AGCTGGTATC AAGGCGCGTC AACTGGTGCC CGACTGTCTG
GCGCTACCGC TACAGGAATG CCAGTGGGCG GCGATGAAAT TTGGCCCAGA TTACCTGCTA
CGTACCAGCA CGGGTAGCGG CGTCAGCCTG GATGCCAGTT GGTTCCAGGC CGCTCTGCCA
AGACTCGCCG AGGCCCAGGA AGAGACGCCC ATCACCCTGG CGAGCTACAG CGATCTGGAT
ATTCAAGGGG TCGAGGTTAA GCCTCAACCG CTGGATCTGC CCATGTTGGT GTTGGCCAAG
GGGATTCTCA ACGCGCCACT AAACCTGCTC AGCGGTATCT ATACCCCTAA GCGCGAATAC
AGCAAGCATC TGCTTTTATG GCGTAATGCC GCCATCGTCA TCCTGGTGGC CCTGGTGTTG
GCTCTGGTCA ACAAGGGACT CAATATTCAT CAGCTGAACG TCGAGCGTGA AGGTCTGCAG
CAGCAGACGG GCGAGATCTT CAAGCAGGTG ATGGGTAGCT CGCGCATGGT GAACGTGCGC
TCGCAGATGG AGAGTCAGCT GCGCACCCTG CAAGGCGCGG GCGGCGGCAT GGCCTTCTTC
ACCATGCTAG ACGATCTTGC CGTTGGTTTC GATAAGGTGC CTGAGCTCAA GCCGACCAGC
CTGCGTTTTG ACGGTGGTCG TAACGAGCTG CGCATGCAGA TCACCGCCAA GAGCTATGCC
CAGATCGAAC AGTTTAAGGA GCTGATCTCG CCTCACTTCC AGGTGGATTC TGGCGCCATG
AACAGCGGCG AAGATGAAGT GACCAGTACC TTAACCCTGA GGAGCAAGTA A
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| Protein sequence | MSERLFIRLG RSAEQSCSWL VWSEQEQEII ASGELSDAQG LSTLTERAGN RPVDILVPAS
AITLTSVQLP EKGQRQALKA LPFMLEETLA ENVDELHFVP GPRNGESLSV AVVAHEQMQT
WLSWLSEAGI KARQLVPDCL ALPLQECQWA AMKFGPDYLL RTSTGSGVSL DASWFQAALP
RLAEAQEETP ITLASYSDLD IQGVEVKPQP LDLPMLVLAK GILNAPLNLL SGIYTPKREY
SKHLLLWRNA AIVILVALVL ALVNKGLNIH QLNVEREGLQ QQTGEIFKQV MGSSRMVNVR
SQMESQLRTL QGAGGGMAFF TMLDDLAVGF DKVPELKPTS LRFDGGRNEL RMQITAKSYA
QIEQFKELIS PHFQVDSGAM NSGEDEVTST LTLRSK
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