Gene Shew_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3605 
Symbol 
ID4922510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4303578 
End bp4304279 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content56% 
IMG OID640165227 
Productcell division ATP-binding protein FtsE 
Protein accessionYP_001095730 
Protein GI127514533 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID[TIGR00960] Type II (General) Secretory Pathway (IISP) Family protein
[TIGR02673] cell division ATP-binding protein FtsE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000127054 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAT TTGAGCAGGT TAGCAAGGTT TATCCCGGTG GTCAGAAGGC CCTCACCGAT 
GTGAGTTTTC ATCTGAAACG CGGTGAGATG GCGTTTTTAA CCGGCCACTC CGGGGCGGGC
AAGAGTACCC TGCTTAAGTT GATCACAGTG ATCGAACGGG CCAATGCCGG TCGTGTCGCC
ATCAATGGCC ACGACATCGC CAACATCAGA CCCAAGGATG TCCCCTTCCT GCGCCGGGAT
ATCGGCATGA TCTTCCAAAA CCATCACCTG TTGATGGACC GCAGCGTCTT TGACAATATA
GCCTTGCCTC TGGTGATCGA GGGCTTCGCC CTGCATGAGA TCAAGAAGCG GGTGCTGGCA
GCCCTGGATA TGGTGGGTCT GTATGGCAAG GAGCGTCACT ATCCCATCAT GTTATCCGGC
GGTGAGCAGC AGCGGGTGGG GATCGCCCGC GCCATCGTCA ACAAGCCGCC ACTACTGTTG
GCCGATGAGC CTACGGGTAA CCTGGATCCT AAGTTGTCCA TGGATATCCT GCGTCTGTTT
GAAACCTTTA ACGATGCCGG TACGACCGTG CTGATCGCCA CCCACGATCT GGGCCTGATA
GCCAGAATGC GTTATCGCAC CCTGACTCTG AAGCAGGGGC GTATCCTGGG CGGTGACGAG
CTGGCGAGCA CTCACACAAC TGCCAGCGCC TTTGGCGAAT AA
 
Protein sequence
MIRFEQVSKV YPGGQKALTD VSFHLKRGEM AFLTGHSGAG KSTLLKLITV IERANAGRVA 
INGHDIANIR PKDVPFLRRD IGMIFQNHHL LMDRSVFDNI ALPLVIEGFA LHEIKKRVLA
ALDMVGLYGK ERHYPIMLSG GEQQRVGIAR AIVNKPPLLL ADEPTGNLDP KLSMDILRLF
ETFNDAGTTV LIATHDLGLI ARMRYRTLTL KQGRILGGDE LASTHTTASA FGE