Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3605 |
Symbol | |
ID | 4922510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4303578 |
End bp | 4304279 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640165227 |
Product | cell division ATP-binding protein FtsE |
Protein accession | YP_001095730 |
Protein GI | 127514533 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2884] Predicted ATPase involved in cell division |
TIGRFAM ID | [TIGR00960] Type II (General) Secretory Pathway (IISP) Family protein [TIGR02673] cell division ATP-binding protein FtsE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000127054 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGAT TTGAGCAGGT TAGCAAGGTT TATCCCGGTG GTCAGAAGGC CCTCACCGAT GTGAGTTTTC ATCTGAAACG CGGTGAGATG GCGTTTTTAA CCGGCCACTC CGGGGCGGGC AAGAGTACCC TGCTTAAGTT GATCACAGTG ATCGAACGGG CCAATGCCGG TCGTGTCGCC ATCAATGGCC ACGACATCGC CAACATCAGA CCCAAGGATG TCCCCTTCCT GCGCCGGGAT ATCGGCATGA TCTTCCAAAA CCATCACCTG TTGATGGACC GCAGCGTCTT TGACAATATA GCCTTGCCTC TGGTGATCGA GGGCTTCGCC CTGCATGAGA TCAAGAAGCG GGTGCTGGCA GCCCTGGATA TGGTGGGTCT GTATGGCAAG GAGCGTCACT ATCCCATCAT GTTATCCGGC GGTGAGCAGC AGCGGGTGGG GATCGCCCGC GCCATCGTCA ACAAGCCGCC ACTACTGTTG GCCGATGAGC CTACGGGTAA CCTGGATCCT AAGTTGTCCA TGGATATCCT GCGTCTGTTT GAAACCTTTA ACGATGCCGG TACGACCGTG CTGATCGCCA CCCACGATCT GGGCCTGATA GCCAGAATGC GTTATCGCAC CCTGACTCTG AAGCAGGGGC GTATCCTGGG CGGTGACGAG CTGGCGAGCA CTCACACAAC TGCCAGCGCC TTTGGCGAAT AA
|
Protein sequence | MIRFEQVSKV YPGGQKALTD VSFHLKRGEM AFLTGHSGAG KSTLLKLITV IERANAGRVA INGHDIANIR PKDVPFLRRD IGMIFQNHHL LMDRSVFDNI ALPLVIEGFA LHEIKKRVLA ALDMVGLYGK ERHYPIMLSG GEQQRVGIAR AIVNKPPLLL ADEPTGNLDP KLSMDILRLF ETFNDAGTTV LIATHDLGLI ARMRYRTLTL KQGRILGGDE LASTHTTASA FGE
|
| |