Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3574 |
Symbol | |
ID | 4922647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4269448 |
End bp | 4270968 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165196 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001095699 |
Protein GI | 127514502 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTACA GCAAGCCAGG CACGACAGAT GCCATAGTTA ACTTCAACAG CCGTTACGAC AACTTCATTG GAGGACAGTG GGTCGCGCCT GTGGGCGGGG AATATTTCGA TAACCGCTCA CCCGTCGACG GCCAGGTGTT TTGTCAGGTG GCCCGCTCGG ACGAGCGTGA TATCGAGCTG GCGCTGGACG CCGCCCACGC CGCCAAGGAT GCCTGGGGCA AGACCTCGGT GACCGAACGC TCCAACTTAC TGCTGAAGAT CGCCGATCGC GTCGAGCAAA ATCTGGAATT TCTGGCCGTG GCCGAGACCT GGGAAAACGG TAAGGCGGTA CGCGAAACCC TGAATGCGGA TCTGCCGCTG TTTGTGGATC ACTTCCGCTA CTTCGCCGGT TGTATCCGCG CCCAGGAAGG CAGCGCCGCC GATATCGACA ACAACACCGT CAGCTACCAC TTCCCCGAGC CGCTGGGCGT CGTCGGCCAG ATCATCCCCT GGAACTTCCC GCTGCTGATG GCCGCCTGGA AAATCGCCCC GGCGCTGGCC GCCGGTAACT GCATAGTGCT CAAGCCCGCC GAGCAGACAC CCGTCTCCAT CCTGGTGATG GTCGAACTCA TTCAGGATCT GCTGCCCGCC GGCGTGCTCA ATATCGTCAA TGGTTTCGGC ACCGAGGCGG GTCAGGCACT GGCGGTCAGC AAGCGCATCG CCAAACTGGC CTTTACCGGT TCGACTCAGA TTGGCCACCA TATCCTCAAG TGCGCCGCCG AGTCGCTGAT CCCCTCAACC GTAGAGCTGG GAGGTAAGTC ACCCAACATC TACTTTGCCG ATGTGATGGA ACAGGAAGAT GAATATCTGG ATAAGGCAGT TGAAGGCATG CTGCTGGCCT TCTTCAACCA GGGCGAGGTC TGTACCTGTC CGTCACGGGT ACTGATCGCC GAGTCCATCT ACGACAAGTT TATAGACAAG GTGATCGCCC GCGCCAAGAC GATCAAGCAG GGCAACCCGC TGGATACCGA CACCCAGGTA GGTGCCCAGG CCTCCCAGGA GCAGTTCGAT AAGATCCTGA GTTACTTGGA GATAGGTCGC AATGAGGGTG CCGAGGTGCT AATTGGTGGT ACCAGCTGTC AGCTATCTGG CGATCAGAGC AGCGGCTTCT ATATCGAACC CACCATACTC AAGGGCCACA ACAAGATGCG CGTCTTCCAG GAGGAGATCT TCGGCCCGGT TATTTCGGTC ACCACCTTCA AAGATGAGGC CGAGGCTTTG GCCATCGCCA ACGACACCGA GTATGGCCTG GGCGCCGGCG TCTGGACCCG CGACATGAAC CGCGCCCAGC GCATGGGACG TGGCATTCAG GCGGGACGCG TGTGGATCAA CTGCTACCAC GCCTACCCAG CCCACGCCGC CTTCGGTGGC TACAAGAAGT CAGGCATAGG TCGCGAGACC CACAAGATGA TGCTCAGCCA CTACCAGAAC ACCAAGAACC TGCTCGTCAG CTACGACGTC AACCCGCTGG GATTCTTCTA A
|
Protein sequence | MIYSKPGTTD AIVNFNSRYD NFIGGQWVAP VGGEYFDNRS PVDGQVFCQV ARSDERDIEL ALDAAHAAKD AWGKTSVTER SNLLLKIADR VEQNLEFLAV AETWENGKAV RETLNADLPL FVDHFRYFAG CIRAQEGSAA DIDNNTVSYH FPEPLGVVGQ IIPWNFPLLM AAWKIAPALA AGNCIVLKPA EQTPVSILVM VELIQDLLPA GVLNIVNGFG TEAGQALAVS KRIAKLAFTG STQIGHHILK CAAESLIPST VELGGKSPNI YFADVMEQED EYLDKAVEGM LLAFFNQGEV CTCPSRVLIA ESIYDKFIDK VIARAKTIKQ GNPLDTDTQV GAQASQEQFD KILSYLEIGR NEGAEVLIGG TSCQLSGDQS SGFYIEPTIL KGHNKMRVFQ EEIFGPVISV TTFKDEAEAL AIANDTEYGL GAGVWTRDMN RAQRMGRGIQ AGRVWINCYH AYPAHAAFGG YKKSGIGRET HKMMLSHYQN TKNLLVSYDV NPLGFF
|
| |