| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3560 |
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| Symbol | |
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| ID | 4922695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4250924 |
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| End bp | 4251979 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165182 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001095685 |
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| Protein GI | 127514488 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAG ACCCTCTGCT CAATCATCTG GTGACGGCCG TACTCGTCAT CTCAGATGAT
CTCAAGCTGT GCTATGCCAA TAGCGCGGCC GAGCAACTGC TTGGGTTAGG CAGTCACCGC
CTCACGGAAC ACAACCTGTT AGACTGCTGC CAGCTGCTGA GCATAGATCA TCAACTGCTG
CGCACCGCCA TTCGCGAACA CCAAGGCCTG ACGGTCAACA CCGCCAACCT GGTGACCCTG
GACGGTCAGG GTCACACGGT CGACATGACA CTCACCCCGC TTGAAGCCCA GCCGGATCAA
CCCGAGCAGG GGGTGCTGGA GCTGCGCCAG GTGGATCAGC AAAGGCGAAT ACATCAGCAG
CTGACCCTGG ATGCCCAGCA ACAGGCGGCC CAATATCTGG TGCGTAACCT GGCCCATGAG
ATCAAAAACC CCCTGGGCGG CCTCAGAGGC GCGGCCCAGC TGCTGTCCCG CGAGCTGGAA
GACGCCGACC AGCGCGAATT TACCGACCTC ATCATAGAGC AGGCCGATCG GCTGAGAAAC
CTGGTGGACC GGCTGCTTGG CCCGCAGAAA CCCACCGAGC ACAGCCTGCA CAACATCCAT
GCTGTGATCC AGAAGGTGCT CAAGCTGGTA AGCGTCACCC TGCCGGGCAA TATCCACCTG
ATCCAGGACT ATGACCCCTC GATCCCGGAT ATCGAGATGG ATCAAGAGCA GCTGCAGCAG
GCGGTACTCA ATATAGTGCA GAACGCCATC CAGGCGCTGG AGACAGTGGA AGACGGCGGC
GAGATCCGCA TCAAGACCCG CACCCAGCAC CAGGTCACCA TAGGCACTAC ACGCCACAAG
CTGGTGCTGG CGCTCTCCAT CATAGACGAT GGCCCGGGGA TCCCACCCGA GCTGATGGAT
ACCCTCTTCT ACCCTATGGT CACGGGCAGG GAGCAGGGAT CCGGACTTGG GCTCTCGATC
GCCCATAACT TTGCCAGACT CCACGGCGGA CGCATCGACT GCGCCTCCGT GCCGGGCAAG
ACAGAATTTA CCATACTGCT GCCGCTCAAG AGCTAG
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| Protein sequence | MNTDPLLNHL VTAVLVISDD LKLCYANSAA EQLLGLGSHR LTEHNLLDCC QLLSIDHQLL
RTAIREHQGL TVNTANLVTL DGQGHTVDMT LTPLEAQPDQ PEQGVLELRQ VDQQRRIHQQ
LTLDAQQQAA QYLVRNLAHE IKNPLGGLRG AAQLLSRELE DADQREFTDL IIEQADRLRN
LVDRLLGPQK PTEHSLHNIH AVIQKVLKLV SVTLPGNIHL IQDYDPSIPD IEMDQEQLQQ
AVLNIVQNAI QALETVEDGG EIRIKTRTQH QVTIGTTRHK LVLALSIIDD GPGIPPELMD
TLFYPMVTGR EQGSGLGLSI AHNFARLHGG RIDCASVPGK TEFTILLPLK S
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