Gene Shew_3559 details

Gene Information

• Locus tag: Shew_3559
• ID: 4922694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 4250249
• End bp: 4250797
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640165181
• Product: hypothetical protein
• Protein accession: YP_001095684
• Protein GI: 127514487

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTTATGC GCCCGATATT GCTGTTTACC CTGCTGTTAA TGACCCTTGG GGCTCAGGCA 
GCCATCTATA AATGGGTCGA CAAGGATGGC AAGGTTCACT ACTCGGATAC CCCGGTAGAA 
AACTCCACCC AGGTCGAGTT TAAGGAAAAT ACCGAAAATC AGATCAAGCT GCCGCCTCCC 
GCGGTACGCG AGCCGCTGAC CCCCGCCAAG GAGGAGCCTA AGGAGCTCTA CAAGCTGAGC 
ATCTCCAGCC CCAGCGAAGA GGAGACCCTG AGGGACAATA ACGGCAATAT CACAGTGATC 
GGCTCCATCA CCCCAGATCT CGCCGCCGGT CATGTGCTGG TGCTCCTGAT GGATGGCAAG 
GTGGTCAGCA CGCCTCAGGC GAGCCCGGTA TTTACGCTGG AGAATGTGGA TCGCGGCGAG 
CACAAGTTTG AAATCAAGGC GTTGGCACAA AACGGCAAAC AACTTGCATC GACCCCCCCT 
AGAACCGTAT TTCTTCACCG GGCGACCATA AATGCGATTC CTAGGGCGAC CCCTCTCGGG 
GGCGGTTAA 

 

Protein sequence

MLMRPILLFT LLLMTLGAQA AIYKWVDKDG KVHYSDTPVE NSTQVEFKEN TENQIKLPPP 
AVREPLTPAK EEPKELYKLS ISSPSEEETL RDNNGNITVI GSITPDLAAG HVLVLLMDGK 
VVSTPQASPV FTLENVDRGE HKFEIKALAQ NGKQLASTPP RTVFLHRATI NAIPRATPLG 
GG