| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3545 |
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| Symbol | rbn |
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| ID | 4922848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4232628 |
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| End bp | 4233485 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165167 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001095670 |
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| Protein GI | 127514473 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.109526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACATC TAAAACAGCG TATCACGGAA GACCAGATAA ATATGCGGGC GGGTCACCTG
GCTTACGTTA CCTTGCTCTC TCTGGTACCT ATGGTGGCAG TGACCATGTC TATGCTGTCG
GCCTTCCCCG TGTTTAAGGG GATCCGCAGC CATATCGAGA CCTTCATCTA CGAGAATTTT
ATCCCCTCTG CCGGCGACAG CGTGCAGATG TATATCAACG AGTTTGTGGC CAACGCCTCC
AAGGGTACGG CCGTGGGTAT CGGCGCCCTG GTGGTAGTGG CTATTCTGCT GATCTCCAAT
ATCGACAAGT CACTCAACGG CATCTGGCGC ACCACGGAGA AGCGCCCCAT GGTGGTCTCC
TTCTCCATGT ATTGGATGGT GCTGACCCTG GGCCCTGTGT TGATGGGTGC CAGCCTGGTG
GCCACCTCTT ATGTGGTGTC GCTCAAGTTG TTTAGCGGCA CAGATCTTAG CGGTGTGGTG
CCCCTCTTAG TTGAGCGTCT GCCCATGTTC TTCTCTGTGG CCACCTTCCT GCTGATCTAC
ATGGTGGTGC CCAATACCAA GGTGAAGTTT TTCCACGCCC TGCTGGGCGC CATCGTGGCG
GCTCTGTTGT TTGAGCTGGG TAAGAAGGGC TTTGCCCTTT ATCTCACCGA GTTTCCCGCC
TATGAAGCTA TCTATGGCGC GCTGGCGACT ATCCCTATCC TGTTTATGTG GGTCTATCTC
TCCTGGATTA TCGTACTGAT CGGCGCCGAG ATCACCGCCG CCATGCCTGA GTACCTCGAT
AAGCGTCTGA TGGACTTGGT GAATAAGGAG CTGGCGGACG ATGAGTCGGA GATCCACTTA
GATGAGCACA AAAGGTGA
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| Protein sequence | MIHLKQRITE DQINMRAGHL AYVTLLSLVP MVAVTMSMLS AFPVFKGIRS HIETFIYENF
IPSAGDSVQM YINEFVANAS KGTAVGIGAL VVVAILLISN IDKSLNGIWR TTEKRPMVVS
FSMYWMVLTL GPVLMGASLV ATSYVVSLKL FSGTDLSGVV PLLVERLPMF FSVATFLLIY
MVVPNTKVKF FHALLGAIVA ALLFELGKKG FALYLTEFPA YEAIYGALAT IPILFMWVYL
SWIIVLIGAE ITAAMPEYLD KRLMDLVNKE LADDESEIHL DEHKR
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