| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3544 |
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| Symbol | |
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| ID | 4922847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4231681 |
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| End bp | 4232631 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165166 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001095669 |
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| Protein GI | 127514472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.369893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCCG CTAAGTCGCA TCCGCTGATC CGTCAGGATT GGATCGATGT CGGCGAGGGG
CACCAGCTGT TTCTGGCACA ATATGGTGAT CCCCAGGGGA TCCCTGTGCT CTATCTTCAT
GGCGGGCCCG GGGCGGGTTG TAACCCCCAG GAGTTGAGGC TGTTTATCGA CCGTGGCTTT
CATATCTATC TGCTGGATCA GCGCGCGGCG GGTCGCTCTA AGCCTTGCGG CGAGGTGGCC
AACAACGACT TTCCCAGCCT GGTGAAGGAT ATCGAGCGGG TGCGTCACTG GGCGGGCATA
GATGCCTGGT GTCTGCTGGG GGGCTCCTTC GGCGCGACCC TGGGCTATCT CTATAGCTGC
ATCTATCCCG AGCGGGTGTT GTCGCAGATC TATTGGGGCA TGTTTATTCC CTCTGCCGAG
GGGATGGAGT GGCTCTATGG TCGTGGCGGC GCCGCGCAGA TCTTCTCCAG CCAGTATCGC
CAGTTTGCCG CCGGCCATGG TGGTACCCTC GATAGCCTGT TTAGTCATTT CACCGATGGC
TTTAATCATA GGGACGCCGA GGTGCGCCGC AACTGCGTGA TGCGCTGGCT CAGTTGGGAG
CTGGCACTGG CGGTGCCCGG TTTCGAGCTG AGTGAGGCCC TGGCCGAGCA AGGCGGAGCC
TTGGCGAGAG TGGAGCTGCA TTATGCCCGC AACGATTATT TCGGTGGTTA TCAGCTGATG
AAGCGGGTGG GTGGGGATCT CACCTGCCCG ACCATCATAT TGCAGGGAGA GCTGGACTGG
GTCTGCCCCC AAAGGCTGGT GGATGAGTTT CTCGACAACC ACGGCCCCAG GCTATTAAGG
TCACGTCTAG TTAAGGGGGG CTATCATACC CTCGCCGACA ACAAGATGTG CCGGGCGGTC
GCCGAGGCGG TGACCCAGAT GGGGCGTTAT CTGGCCGCCG GCCGTTCCTA A
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| Protein sequence | MSPAKSHPLI RQDWIDVGEG HQLFLAQYGD PQGIPVLYLH GGPGAGCNPQ ELRLFIDRGF
HIYLLDQRAA GRSKPCGEVA NNDFPSLVKD IERVRHWAGI DAWCLLGGSF GATLGYLYSC
IYPERVLSQI YWGMFIPSAE GMEWLYGRGG AAQIFSSQYR QFAAGHGGTL DSLFSHFTDG
FNHRDAEVRR NCVMRWLSWE LALAVPGFEL SEALAEQGGA LARVELHYAR NDYFGGYQLM
KRVGGDLTCP TIILQGELDW VCPQRLVDEF LDNHGPRLLR SRLVKGGYHT LADNKMCRAV
AEAVTQMGRY LAAGRS
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