| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3531 |
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| Symbol | |
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| ID | 4922864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4218753 |
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| End bp | 4220009 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165153 |
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| Product | aromatic amino acid transporter |
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| Protein accession | YP_001095656 |
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| Protein GI | 127514459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATC ATATGAATGC GGCCAAGCAC AAGGCCTCGG GTAAGTCGCT GCTGGGCGGC
GCCATGATCA TCGCAGGTAC GGCCGTGGGC GCAGGGATGT TCTCCCTGCC TGTGGTCGGC
GCCGGCATGT GGTTTAGCTA CTCTGTACTC ATGATGCTGG GCGTCTGGTT CTGCATGCTG
GTCTCTGGCC TGCTGCTACT GGAGACCAAC CTGCACTATG AGCCGGGTGC CAGCTTCGAT
ACCCTCACCC GGGATACCCT GGGTAACTTC TGGCGTATCG TCAACGGCCT CTCTATCGCC
TTCGTGCTCT ATATTCTGGC CTATGCCTAT ATCAGTGGCG GCGGCTCTAT CGTCAACCAC
AGCCTAAGTA GCTTAGGGGT AGAGCTGCCC CAGAGTTTCG CCGGCCTGGT GTTTGCGGTT
GGCCTGGCGA TTATCGTCTT TATCAGCACC AAGGCGGTGG ATCGCATCAC CACCATCATG
CTGGGCGGGA TGATCATCAC CTTCTTCCTC GCCATAGGGA ATCTGCTTAT CGAGGTGGAA
CCCGCCAAGC TGTTCGTGCC CGATGGTGAG GCCAATTATC TGCCCTATAT GCTGGCCGCC
ATCCCCTTCG GTCTGGTGAG TTTCGGCTAT CACGGCAACG TCCCCAGCCT GGTAAAATAC
TATGGCAAGG ACCCAGGCAC TATCGTCAAG GCGATCACCT TAGGTACCCT CATCGCCTTC
GTGATCTACC TGTGCTGGCT GGTCGCTACC ATGGGGAACA TCACTCGCAG CGGCTTCGTC
GAGGTGATTG CCCAGGGCGG TAACATGGGC GTGCTGGTTG CGGCGCTCTC GGATGTGATG
GCCAGCGACT GGCTGACCAC AATGCTGACC CTGTTTGCCA ACCTGGCGGT CGCCTCCTCC
TTCCTCGGGG TGACCCTGGG GCTGTTCGAC TATCTCGCCG ACCTGTTTGG CTTCGATGAG
TCGCGCACCG GACGCCTCAA GACGGCGGCA GTGACCTTCC TGCCACCAAC TGTGTTAGGT
CTGCTGTTCC CCAACGGCTT TTTGATCGCC ATTGGCTTTG CCGCCCTGGC CGCCACCGTA
TGGGCTGCCA TAGTGCCGGC CCTGATGGCC TATCGCGCCA GACAGATGTT CCCAGACAGC
CAGAGTTTCA GGGTGCCAGG CGGCACTGTG GTGATCGCCA TAGTGATCTT CTACGGCCTG
TTGACCGCGG CCTGCCACCT GCTTGCCATG GCAGACCTGC TACCCATGTA CGGCTAG
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| Protein sequence | MANHMNAAKH KASGKSLLGG AMIIAGTAVG AGMFSLPVVG AGMWFSYSVL MMLGVWFCML
VSGLLLLETN LHYEPGASFD TLTRDTLGNF WRIVNGLSIA FVLYILAYAY ISGGGSIVNH
SLSSLGVELP QSFAGLVFAV GLAIIVFIST KAVDRITTIM LGGMIITFFL AIGNLLIEVE
PAKLFVPDGE ANYLPYMLAA IPFGLVSFGY HGNVPSLVKY YGKDPGTIVK AITLGTLIAF
VIYLCWLVAT MGNITRSGFV EVIAQGGNMG VLVAALSDVM ASDWLTTMLT LFANLAVASS
FLGVTLGLFD YLADLFGFDE SRTGRLKTAA VTFLPPTVLG LLFPNGFLIA IGFAALAATV
WAAIVPALMA YRARQMFPDS QSFRVPGGTV VIAIVIFYGL LTAACHLLAM ADLLPMYG
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