Gene Shew_3497 details

Gene Information

• Locus tag: Shew_3497
• Symbol: gmk
• ID: 4923049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 4183670
• End bp: 4184293
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640165119
• Product: guanylate kinase
• Protein accession: YP_001095622
• Protein GI: 127514425
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGCTC GCGGAAACCT CTTTATCATT TCAGCGCCCA GTGGCGCCGG CAAGTCTTCA 
CTTCTTAGCG CTATTTTGCA GGATAAACCC GCCGATATGA AGGTCTCTGT GTCACACACG 
ACACGCCAAC CCAGAGTCGG CGAAGTCGAT GGCGAGCACT ATCATTTCGT CAACGTCGAC 
GAATTCAAGG CGCTGATCGA CAAGCAGGCC TTCTTCGAAT GGGCCGAGGT GTTCGGTAAC 
TATTATGGCA CCTCTAAGGC GGCCATCGAG GTGATGCTGG AAAAGGGCAT AGACGTGTTT 
CTCGACATCG ACTGGCAGGG CGCCCAGCAA GTTAAAGAGA TGATGCCAGA GGCGATTGGC 
GTCTTCATCC TGCCGCCCTC TAAGGCGGAG CTTGAGCGTC GCCTAACCGG CCGTGGTCAA 
GACAGTGCCG AGGTGATTGC TGGCCGTATG GCCCAGGCAA CCTCGGAGAT CTCTCACTAT 
GGCGAATATG ACTTCATCAT AGTGAACGAT GACTTCGAGC AGGCACAGGT GGATTTAAAG 
GCAATTATTC GCAGCCAACG CCTCACTCGT GCTAGTCAAA TTCATGCTCA AAATGATATG 
CTTAATGATC TGTTGGCAGA CTAA 

 

Protein sequence

MTARGNLFII SAPSGAGKSS LLSAILQDKP ADMKVSVSHT TRQPRVGEVD GEHYHFVNVD 
EFKALIDKQA FFEWAEVFGN YYGTSKAAIE VMLEKGIDVF LDIDWQGAQQ VKEMMPEAIG 
VFILPPSKAE LERRLTGRGQ DSAEVIAGRM AQATSEISHY GEYDFIIVND DFEQAQVDLK 
AIIRSQRLTR ASQIHAQNDM LNDLLAD