| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3487 |
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| Symbol | pyrE |
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| ID | 4923165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4172971 |
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| End bp | 4173612 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165109 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_001095612 |
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| Protein GI | 127514415 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAGCCT ATCAACGTGA GTTTATTGAG TTTGCCCTTG AGCGTCAGGT ATTACGTTTT
GGCGAATTTA CGTTAAAGTC AGGCCGCACT AGCCCTTACT TCTTTAATGC CGGCCTGTTT
AACACCGGGC GTGATCTAGC GCGTCTGGGT CGCTTCTACG CGGCGGCGCT GGTGGATTCG
GGTATCGAGT ATGACCTGCT GTTTGGCCCG GCCTACAAAG GGATTCCTAT CGCGACCACC
ACGGCGGTGG CTCTGTGCGA TCACCATGAT ATCGATATGC CTTACTGCTT TAACCGTAAG
GAGAAGAAAG ATCACGGCGA GGGTGGCAGC CTGGTGGGCA GCGAGCTTAA GGGCCGCGTG
ATGCTGGTGG ACGATGTGAT CACCGCAGGG ACTGCGATTC GCGAATCGAT GGAGATCATC
GAGGCACACA ATGCCGAGCT GGCGGGCGTG TTGATTGCGC TGGATCGTCA GGAGAAAGGC
AAGGGCGAGC TGTCGGCTAT TCAGGAAGTC GAGCGCGACT TTGGCTGCAA TATCGTCTCT
ATCATCAAGC TGGAAGATCT GATCAACTAC CTGTCGGAAA AACCTGGCAT GGAAGATCAG
TTGGCGTCGG TAAGCGCCTA TCGCGACCAA TACGGTATCT AA
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| Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRT SPYFFNAGLF NTGRDLARLG RFYAAALVDS
GIEYDLLFGP AYKGIPIATT TAVALCDHHD IDMPYCFNRK EKKDHGEGGS LVGSELKGRV
MLVDDVITAG TAIRESMEII EAHNAELAGV LIALDRQEKG KGELSAIQEV ERDFGCNIVS
IIKLEDLINY LSEKPGMEDQ LASVSAYRDQ YGI
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