| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3484 |
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| Symbol | slmA |
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| ID | 4923162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4169312 |
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| End bp | 4169905 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165106 |
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| Product | nucleoid occlusion protein |
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| Protein accession | YP_001095609 |
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| Protein GI | 127514412 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000984177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCAA GCCCTAAAAT CAACCGACGC GAACATATTC TTCAATGTCT GGCTACCATG
CTAGAAACCA GTCCCGGTCA ACGAATCACC ACGGCAAAAC TTGCCGCCGA GGTGGGCGTG
TCTGAGGCGG CGCTCTATCG CCACTTTCCC AGCAAAGCGA GAATGTTCGA GGGGCTGATC
GACTTTATCG AAGAATCGCT GCTATCGCGC ATCAACCTCA TCATGGATGA AGAGAAAGAC
ACCATGAGAC GCTGTCAGTT GCTGCTGCAA CTCTTGCTGG TATTTGCCGA GCGCAACCCA
GGGATCTCCC GCGTACTCAA CGGCGACGCC CTGTTAGGCG AAAATGAGCG ACTACGGAAC
CGTACCGGCC AGATCTTCTC CAAGGTTGAG ACTCACCTGA AACAGATCCT CAGAGAGAAG
ACCTTGAGAG AAGGCAAAGG CTTTAACCTG GACGAGGCAA TCCTGGCTAA CCTACTGCTG
GCCGTGGCCG AAGGCCGCAT CGCCCAATTC GTGCGCAGCG ACTTCAAAAA CAAGCCCACA
GAACACTTCG CCGAGCAGTG GCAGTTTATT CAGCAGCAGC TACTTCAGAG TTAA
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| Protein sequence | MAASPKINRR EHILQCLATM LETSPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI
DFIEESLLSR INLIMDEEKD TMRRCQLLLQ LLLVFAERNP GISRVLNGDA LLGENERLRN
RTGQIFSKVE THLKQILREK TLREGKGFNL DEAILANLLL AVAEGRIAQF VRSDFKNKPT
EHFAEQWQFI QQQLLQS
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