| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3479 |
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| Symbol | rpmG |
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| ID | 4923157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4166177 |
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| End bp | 4166350 |
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| Gene Length | 174 bp |
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| Protein Length | 57 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165101 |
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| Product | 50S ribosomal protein L33 |
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| Protein accession | YP_001095604 |
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| Protein GI | 127514407 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0267] Ribosomal protein L33 |
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| TIGRFAM ID | [TIGR01023] ribosomal protein L33, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0020759 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG CTAAAGGTAA CCGTGAGAAG ATCAAGCTAG TTTCTAGCGC TAAAACAGGT
CACTTCTACA CGACTGAGAA AAACAAGCGT AACATGCCTG AAAAGATGGA GATCAAGAAA
TTTGATCCCG TTATCCGTCA GCACGTTATC TACAAAGAAG CGAAAATCAA GTAA
|
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| Protein sequence | MAKAKGNREK IKLVSSAKTG HFYTTEKNKR NMPEKMEIKK FDPVIRQHVI YKEAKIK
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