| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3468 |
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| Symbol | |
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| ID | 4922470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4151263 |
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| End bp | 4152618 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165090 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001095593 |
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| Protein GI | 127514396 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000521115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.254623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA AGCATATTTT ATCTTTAGCT GTAGTTGCTG CCATCGCCAC GCCGCTATCT
CAAGTTCAGG CCGCTGGATT TCAACTTGCC GAATATTCTG CCACGGGTCT AGGCCGTGCC
TTTGCGGGTG AGGCGGCCAT GGCCGACAAC GCCGCTGCTC AGGCGCGCAA CCCTGCTATG
TTGACCTACC TCGAGGGACG TCAGCTGTCG CTGGGTGGTA TCTATGTAAT GCCAAACGTC
GACGTTGAGG GCGACGTGAC TCTGGCTTCA CCTGTGTTAG GGCCTCAGGG TGTGACCATG
AACGCCGATG CCCTGGATGT GGCTGACGAC GCCCTGGTGC CTAACTTCTA CTATTCTAAC
CAGCTTAACG ACCAGTGGAC CTGGGGTTTA GCGGTTAACT CTAACTATGG TCTGGCGACC
GAGGTGCCGA GCACGCATCC TACCGCTATC TTTGGTAAAG AAACTTCAGT GACCACTGTG
GAGTTCAATC CAAATCTGGC TTACAAGGTG TCTGAGGCCG TTTCTGTCGG TGCGGGCCTG
CGTATCGTCT ATGGCGAAGG TAAGATTGGC GCCTCTACGC CGGCTTGGGT CGATGGCATC
AAGGCGATCC CTACTCTGCC TGCCGAGATC GCAGGCGCAC TACCACCAGG TGGCACTAGC
CTGAAATCGA TGGAAGGCGA TGATATTGGC TACGGTTGGC AGCTGGGTGC CAGCTGGCAG
ATCAACCCGG CGCACCGTAT CGGTCTGGCC TATCACAGTG GCGTCGAGCT GGAACTCGAC
GGTCATGCCT CTGGCCTGAT CTACAACGGT GGTCAGGATG TGGAGATCGA GGGTTATATG
CCACTCGAGC TACCAGCCTT TGCCGAGTTG GCCTCTTACC ATCAGCTCAC CGACAACTGG
GCGATGCATG CCAGCATTAA CTGGACCCAG TGGAGCGTGT TCGATCAACT GGTGGCTTAC
TTCCCAGGCG AGCAGAAGCC TGTTGGCGGC CTGGAGTCGG ACCTGGTGAA GGTTGAGAAC
TTTAAAGACA ACTGGCGTTT TGCCCTGGGC ACCAGCTATC AGCTAAGCGA TAAGTGGCTG
GTACGAGGTG GTGTGGCGCT GGATAAGACG GCGGTAGAAG ATGAGTATCG CACCATCACT
ATCCCCGATT CAGACCGTCT GTGGTTCAGT GCGGGTGCTG GCTATCAAGC CTCTAAGAAC
CTGACTTTGG ACTTTGCCGT GACTTACATC AAGGCCCACG GTGATGCGCC GATCAACGAG
ACCATGAACC TGATGAACCT GGCTCAGGTG AGCTTTAACG GTGAAGCGGG TGGCGATGTC
TGGTTGCTGG GCGCTCAGTT AAGCTACAAG ATGTAA
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| Protein sequence | MMKKHILSLA VVAAIATPLS QVQAAGFQLA EYSATGLGRA FAGEAAMADN AAAQARNPAM
LTYLEGRQLS LGGIYVMPNV DVEGDVTLAS PVLGPQGVTM NADALDVADD ALVPNFYYSN
QLNDQWTWGL AVNSNYGLAT EVPSTHPTAI FGKETSVTTV EFNPNLAYKV SEAVSVGAGL
RIVYGEGKIG ASTPAWVDGI KAIPTLPAEI AGALPPGGTS LKSMEGDDIG YGWQLGASWQ
INPAHRIGLA YHSGVELELD GHASGLIYNG GQDVEIEGYM PLELPAFAEL ASYHQLTDNW
AMHASINWTQ WSVFDQLVAY FPGEQKPVGG LESDLVKVEN FKDNWRFALG TSYQLSDKWL
VRGGVALDKT AVEDEYRTIT IPDSDRLWFS AGAGYQASKN LTLDFAVTYI KAHGDAPINE
TMNLMNLAQV SFNGEAGGDV WLLGAQLSYK M
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