Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3459 |
Symbol | |
ID | 4923384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4142746 |
End bp | 4144482 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165081 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_001095584 |
Protein GI | 127514387 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0440693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGGCGAAACG TAAACAGAAA CCACAGCTGA TCCACTGGCG TCTCTACGTC GTGGTCGGTT TCGTGTGTCT GCTGTTTACC AGCCTGGTGG GCCGCGCCGC CTATATTCAG ATCATAGAGC CTGAAAAACT GCGTCACGAG AGTGACATGC GCACCCTGCG TACCACGAGT AACGAGGTGC ACCGTGGCAT GATCACCGAC CGTAACGGTG AGATGCTGGC GGTGAGCGTA CCCGTCAAGG CGGTCTACGC CGATCCTAAG GTGGTGCACG ATCGTAACGG CTTCGCCGAT ATGCGCCGCT GGCAGGCGCT GGCCGACGTG CTGCACGAGC CCAAGGAGGA GATCCTGGCG CGAGTGCAGA CTAACCCCAA GAAACGTTTT ACCTACTTAA AGCGTCAGGT TACACCTGCG GTGGCCGAGT ATATCAAGCA GCTTAAGCTG CCCGGCGTCT ACCTCAAGGC CGAATCGCGC CGCTACTATC CTACCAGTGA GATCAGCGCG CAGCTGGTGG GCCTGACCAA TATCGACGAT AAGGGCATCG AAGGGATCGA GAGCACCTAC AACGACTGGC TCACAGGTAC GCCCACCAAA CATAAGGTAC GTAAGTCCCG CGACGGTCAC GTGGTCGAGC GTCTGGATAC GGTACAGACC GGCGAGAGCT CTAACGATCT AGTGCTGAGT ATCGATCAGC GCATTCAGCA GCTGGCCTAC CGCGAGATCA AGCGCGCCAC CGAGATCAAT CAGGCTACCT CGGCCTCTAT CGTGGTGCTC GACGTGCACA CCGGCGAGGT GTTGGCCATG GCTAATACCC CCAGCTACAA CCCTAACTCC CGGGATAACC TGCAAAGCTA TCGCATGCGT AACCGGGCCC TGACCGACGC CTATGAGCCG GGTTCCACCA TCAAGCCCTT CGTGGTCGCC GCGGCGCTCG AGGCCGGCAC CATCAAGGAA GATCAGATCT TCAAAACACA TCCGGGCCGC GTGCGTATCG GCGGCAAGAT AGTGCGCGAC GGTCGCAACT ATGGCGACAT GTCTCTCGGT GATGTCTTGG TGCATTCCAG TAACGTGGGG ATGACACAGA TCGCTTTGTC TATGCCGGTA CAGGAGCTGC TGGGTTACTA TCAGGCCATG GGGCTGGGTA ACTATTCTGG CATCAACCTG CCGGGCGAGA GCGCCGGTCT TATTCACGAC CGTCGACGTT GGTCCGATTT TGAGCGGGCA ACTCTCTCCT TCGGTTATGC CCTGACCGTC ACACCACTGC AGATCGCCCG CATGTACGCC ATGTTGGGTA GCGGCGGCGT GCTTTATCCC TCATCGATCC TCAAGCTGAA GAAGGAGCCC GAGGGCGAGC AGGTGATCTC TCCCGAGGTG GCCCGCAGCG TGATGCAGAT GCTGATCGGG GTAACCGAGC CAGGCGGCAC GGCCAAGAAG GCCCATATCG ACGGCTACCC GGTTGCGGGT AAGACGGGTA CCGCCCGTAA GGCCGTGGCC GGTGGCTATG GTGAAGATTA TGTCGCCCTG TTTGCCGGGG TCGCGCCCGT ACACAATCCG AGACTCGCCA TGGTGGTGGT AGTCAATGAG CCCAAGGGCG ATCGTTATTA TGGCGGCGAT GTGGCCGCTC CCGTGTTTGC CAAAGTGATG TCAGGGGCAC TACAGATGTT AAATGTTGAG CCGATCAGCG CTCGAGAAAA AGTTCAATTG GCCGGTAATG TCAGGAGGGG CGAATAA
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Protein sequence | MSKQAKRKQK PQLIHWRLYV VVGFVCLLFT SLVGRAAYIQ IIEPEKLRHE SDMRTLRTTS NEVHRGMITD RNGEMLAVSV PVKAVYADPK VVHDRNGFAD MRRWQALADV LHEPKEEILA RVQTNPKKRF TYLKRQVTPA VAEYIKQLKL PGVYLKAESR RYYPTSEISA QLVGLTNIDD KGIEGIESTY NDWLTGTPTK HKVRKSRDGH VVERLDTVQT GESSNDLVLS IDQRIQQLAY REIKRATEIN QATSASIVVL DVHTGEVLAM ANTPSYNPNS RDNLQSYRMR NRALTDAYEP GSTIKPFVVA AALEAGTIKE DQIFKTHPGR VRIGGKIVRD GRNYGDMSLG DVLVHSSNVG MTQIALSMPV QELLGYYQAM GLGNYSGINL PGESAGLIHD RRRWSDFERA TLSFGYALTV TPLQIARMYA MLGSGGVLYP SSILKLKKEP EGEQVISPEV ARSVMQMLIG VTEPGGTAKK AHIDGYPVAG KTGTARKAVA GGYGEDYVAL FAGVAPVHNP RLAMVVVVNE PKGDRYYGGD VAAPVFAKVM SGALQMLNVE PISAREKVQL AGNVRRGE
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