| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3424 |
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| Symbol | |
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| ID | 4923504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4079474 |
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| End bp | 4082071 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165036 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_001095549 |
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| Protein GI | 127514352 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000873552 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGAAG CATATCGTAA ACACGTCGCA GAACGTGCTG CAGAGGGCGT AGTCCCTAAG
CCACTAGATG CCCATCAAGT GGCCGAATTA ATCGAATTAG TTAAGAATCC ACCTGCGGGT
GAAGAGGAGT TCATCCTCGA CCTGCTGGAA AACAGAATTC CACCAGGTGT TGACGAAGCG
GCCTATGTGA AAGCCGGTTT CCTCGACGCG GTTGCCAAAG GTGAGGCAAC ATCTCCTATC
CTGTCTGCGG CGCGCGCCGT TGAGCTACTG GGTACCATGC AGGGCGGTTA CAACATCGAG
CCGCTGATCG CGCAACTCGA CAATGACGTT CAGGCACCAT TGGCGGTTAA GGCACTGTCA
AACACCCTGC TGATGTTCGA TGCCTACCAC GATGTGGTTG AGAAGATGCA AGCGGGCAAC
GCTCACGCTA AGCAAGTGGT TGAGTCTTGG GCGAACGCCG AGTGGTTCCT CAGCCGTCCT
AAGCTGGCCG ACAAGGTTAC CCTGACCGTA TTCAAGGTGA CAGGTGAAAC CAACACAGAC
GATCTGTCAC CAGCTCCTGA TGCCTGGTCT CGTCCAGATA TCCCACTGCA CGCCCTGGCG
ATGCTGAAAA ACGCGCGCGA CGGCATAGTA CCTGACGAAG CGGGCGTGAA AGGCCCAATT
AATGAGATCG AAGCCCTGAA ACAGAAGGGT CATCCACTGG TTTATGTAGG CGACGTTGTG
GGTACAGGTT CTTCACGTAA GTCTGCGACC AACTCTGTAC TTTGGTTCAT GGGCGACGAT
ATCCCATTCG TACCTAACAA GCGTGCCGGT GGTTTCTGTC TAGGTGGCAA GATCGCGCCT
ATCTTCTTCA ACACCATGGA AGATGCCGGT GCACTGCCAA TCGAGCTAGA CGTAAGCAAG
ATGAACATGG GCGATGTGAT CGACATCTAC CCATACGAAG GCGTGGTTAA GCTACACGGC
AGCGACGAAG TGATCTCTGA GTTCAAGCTC AAGACTGACG TGCTGCTTGA CGAAGTACGT
GCCGGTGGCC GTATTCCGCT GATCATCGGT CGTGGTCTGA CTGATCGCGC TCGTGAGACC
CTAGGTCTAC CAGCCTCTGA CGTGTTCGTA CGTCCACAAG ATGTGGCCGA TTCTGGTAAG
GGTTACACCT TGGCACAGAA GATGGTGGGT AAGGCATGCG GCGTAGCCGG TGTGCGTCCT
GGCCAATACT GCGAGCCTAA GATGACTTCT GTGGGTTCAC AAGACACCAC AGGTCCTATG
ACACGTGACG AGTTGAAAGA CTTGGCATGT CTTGGCTTCA GCGCCGACCT GACCATGCAG
TCATTCTGTC ACACTGCCGC TTATCCTAAG CCAGTTGACG TGAACACTCA TCATACGCTA
CCTGACTTCA TCATGAACCG TGGCGGTGTA TCGCTGCGTC CTGGTGACGG TGTTATCCAC
TCTTGGTTAA ACCGTATGCT GCTGCCTGAT ACCGTAGGTA CGGGTGGTGA CTCGCATACT
CGTTTCCCAA TCGGTATCTC TTTCCCAGCG GGTTCTGGTC TGGTGGCTTT CGCCGCTGCG
ACCGGTGTGA TGCCACTGGA TATGCCTGAG TCTATCTTGG TTCGCTTCAA GGGCGAAATG
CAGCCTGGTA TCACACTACG TGACCTGGTA CATGCGATTC CGCATAAGGC GATCGAAATG
GGTCTGCTGA CTGTTGAGAA GAAAGGCAAG ATCAACGCCT TCTCTGGTCG TATCCTGGAG
ATCGAAGGTC TGGAGAAGCT GAAGGTTGAG CAGGCATTCG AACTGTCTGA TGCCTCTGCC
GAGCGCAGTG CTGCCGGTTG TACTATCAAG CTGGACAAAG AGCCTATCAT CGAATACCTC
AACTCTAACA TAGTGATGTT GAAGTGGATG ATCGCCGAAG GTTACGGTGA CCGTCGCACT
ATCGAGCGTC GTATCGCCGC GATGGAAGAG TGGTTGGCTA ACCCAGAGCT GATGGCTGCC
GATGCTGATG CAGAATACGC CGAAGTGATC GAGATCGATC TGAACGAGAT CAAAGAGCCT
ATCCTGTGTG CACCAAACGA TCCAGATGAT GCCGTGCTCC TGTCTCAGGT GAAAGACACC
CAGATCGACG AGGTGTTCGT TGGTTCTTGT ATGACCAACA TCGGCCACTT CCGTGCAACC
GGTAAGATGC TAGACAAGTT CGCCAAGACG CTACCAACCC GTTTGTGGAT CGCGCCACCA
ACTAAGATGG ACCGCGATCA ACTGACAGAA GAGGGTTACT ACGCCATCTT CGGTCGTGTC
GGTGCGCGCA TCGAGATCCC TGGTTGTTCT CTGTGTATGG GTAACCAGGC ACGTGTTGCC
GAGGGCGCGA CGGTAGTATC TACCTCTACC CGTAACTTCC CGAACCGTCT GGGTACCGGC
GCAAACGTCT ACCTGGCGTC TGCCGAGCTG GCCGCGGTTG CCGCGCTGTT GGGTCGTCTG
CCAAGCGTTG AAGAGTATCA AGAGTACGCC AAAGAGATCG ATGCCACTGC AGCCGATACT
TACCGTTACC TGAACTTCGA CCAGATCGAT TCATACACAC AAAAAGCGGG CGAAGTGATC
TTCCAGTCTG CCGTGTAA
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| Protein sequence | MLEAYRKHVA ERAAEGVVPK PLDAHQVAEL IELVKNPPAG EEEFILDLLE NRIPPGVDEA
AYVKAGFLDA VAKGEATSPI LSAARAVELL GTMQGGYNIE PLIAQLDNDV QAPLAVKALS
NTLLMFDAYH DVVEKMQAGN AHAKQVVESW ANAEWFLSRP KLADKVTLTV FKVTGETNTD
DLSPAPDAWS RPDIPLHALA MLKNARDGIV PDEAGVKGPI NEIEALKQKG HPLVYVGDVV
GTGSSRKSAT NSVLWFMGDD IPFVPNKRAG GFCLGGKIAP IFFNTMEDAG ALPIELDVSK
MNMGDVIDIY PYEGVVKLHG SDEVISEFKL KTDVLLDEVR AGGRIPLIIG RGLTDRARET
LGLPASDVFV RPQDVADSGK GYTLAQKMVG KACGVAGVRP GQYCEPKMTS VGSQDTTGPM
TRDELKDLAC LGFSADLTMQ SFCHTAAYPK PVDVNTHHTL PDFIMNRGGV SLRPGDGVIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SILVRFKGEM
QPGITLRDLV HAIPHKAIEM GLLTVEKKGK INAFSGRILE IEGLEKLKVE QAFELSDASA
ERSAAGCTIK LDKEPIIEYL NSNIVMLKWM IAEGYGDRRT IERRIAAMEE WLANPELMAA
DADAEYAEVI EIDLNEIKEP ILCAPNDPDD AVLLSQVKDT QIDEVFVGSC MTNIGHFRAT
GKMLDKFAKT LPTRLWIAPP TKMDRDQLTE EGYYAIFGRV GARIEIPGCS LCMGNQARVA
EGATVVSTST RNFPNRLGTG ANVYLASAEL AAVAALLGRL PSVEEYQEYA KEIDATAADT
YRYLNFDQID SYTQKAGEVI FQSAV
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