Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3412 |
Symbol | purH |
ID | 4923566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4063067 |
End bp | 4064656 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640165024 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_001095537 |
Protein GI | 127514340 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATG CCAGACCTAT TCGTCGCGCG CTGTTAAGCG TTTCTGATAA AACCGGAATC CTGGAGTTTG CACAAGCCCT GCACGCTCAA GGTGTTGAAC TGCTATCTAC CGGCGGCACC GCCCGTCTGC TAGCAGACAA CGGTGTGCCT GTCATTGAAG TCTCTGACTA CACGGGCCAT CCTGAGATCA TGGACGGCCG CGTAAAGACC CTGCACCCTA AAGTGCACGG CGGCATCCTC GGCCGTCGCG GTATCGATGA GATAGTGATG GAACAGAACG CCATTAAGCC TATCGATCTG GTTGCCGTTA ACCTCTACCC CTTTGCCGAG ACTGTGGCCA AAGAAGGCTG CACCCTGGCC GACGCCGTGG AAAACATCGA CATCGGCGGC CCAACCATGG TGCGCTCTAC CGCGAAGAAC CACAAAGACA CCACCATTGT CGTTAACGCC AAAGACTATG ATCGCGTGAT CCAAGAGATG CAGGCCAACC AGGGTAGCAC CACGCTGGAG ACACGTTTCG ATCTGGCTAT CGCCGCCTTC GAACACACGG CCGCCTACGA TGGCATGATC GCCAACTACT TCGGCACCAT GGTACCGGCG CACAGCCAGG ACGAGTGCCA CCAGGATTCT AAGTTCCCAC GCACCTACAA CACTCAGTTG GTGAAGAAGC AAGATCTGCG TTACGGCGAG AACAGCCACC AGAGCGCCGC CTTCTATGTG GACCTCAACA TCGACGAAGC CTCGGTTGCC AGCGCGACTC AGCTACAGGG TAAGGCACTG TCTTACAACA ACATAGCCGA TACCGATGCG GCGCTGGAAT GCGTCAAAGA GTTCAGCGAG CCGGCCTGTG TTATCGTCAA GCACGCCAAC CCTTGTGGCG TCGCCATCGG CAAGGATCTG CTCGAGGCCT ACAACCGCGC CTACCAGACC GACCCAACCT CAGCCTTCGG CGGCATCATC GCCTTCAACG GTGAGCTGGA TGCAGAGACC GCCAGCGCCA TCGTCGAGCG TCAGTTTGTC GAGGTGATCA TCGCACCTGT CGTTAGCCAG GCGGCACGCG ACGTGGTGGC AGCCAAGGCC AACGTCCGTC TGCTGGAGTG TGGTCAATGG GCTAGCAAGA CCCGCAGCCT GGACTACAAG CGCGTCAACG GCGGCCTGCT GATCCAAGAC AGAGACCAAG GCATGGTCGA GATGAGCGAC ATCAAGGTAG TGACTAAGCG TCAGCCTACC GAAGCCGAGA TGAAAGATCT CATGTTCTGC TGGAAGGTGG CCAAGTTCGT TAAGTCTAAC GCCATCGTCT ACGCCAAAGA CAGCATGACA ATCGGCGTGG GCGCCGGCCA GATGAGCCGC GTCTACAGCG CCAAGGTGGC CGGTATCAAG GCTGCCGATG AGAATCTGGA AGTCGTAGGT TCTGTCATGG CATCCGATGC CTTCTTCCCG TTCCGCGATG GCATCGACGC CGCGGCGGCC GCCGGTATCA GCTGCATCAT CCAGCCGGGC GGTTCGATTC GCGATGAAGA GATCATCGCA GCCGCCGACG AGCATGGCAT GGCCATGGTC TTCACCGGCA TGCGTCACTT CCGTCATTAA
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Protein sequence | MNNARPIRRA LLSVSDKTGI LEFAQALHAQ GVELLSTGGT ARLLADNGVP VIEVSDYTGH PEIMDGRVKT LHPKVHGGIL GRRGIDEIVM EQNAIKPIDL VAVNLYPFAE TVAKEGCTLA DAVENIDIGG PTMVRSTAKN HKDTTIVVNA KDYDRVIQEM QANQGSTTLE TRFDLAIAAF EHTAAYDGMI ANYFGTMVPA HSQDECHQDS KFPRTYNTQL VKKQDLRYGE NSHQSAAFYV DLNIDEASVA SATQLQGKAL SYNNIADTDA ALECVKEFSE PACVIVKHAN PCGVAIGKDL LEAYNRAYQT DPTSAFGGII AFNGELDAET ASAIVERQFV EVIIAPVVSQ AARDVVAAKA NVRLLECGQW ASKTRSLDYK RVNGGLLIQD RDQGMVEMSD IKVVTKRQPT EAEMKDLMFC WKVAKFVKSN AIVYAKDSMT IGVGAGQMSR VYSAKVAGIK AADENLEVVG SVMASDAFFP FRDGIDAAAA AGISCIIQPG GSIRDEEIIA AADEHGMAMV FTGMRHFRH
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