| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3303 |
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| Symbol | |
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| ID | 4920804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3945305 |
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| End bp | 3946090 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164915 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095428 |
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| Protein GI | 127514231 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.236895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTGA TTGATCAAAT CGCCCGCTTA GGTCGTGGTG CGATCGATAG TGTCACCGGC
CTGGGACGTG CCGGACTCAT GTTGTGGGGC GCCATCGCCA AGATACCCAG GGTGCGCAAG
GGCACGCCTC TGCTGATCAA GCAGCTGTAC GTGATTGGCG TGCAGTCCAT GGTGATCATC
CTGGTCTCCG GCCTCTTCAT CGGTATGGTG CTGGCGTTGC AGGGCTATAA TATTTTGGTG
GGTTTCGGCA CTGAAGACAG CCTGGGGCCC ATGGTGGCGC TCAGTCTGCT GCGTGAGCTG
GGGCCCGTGG TGACCGCGCT GCTGTTTGCC GGACGCGCCG GCTCGGCGCT CACCGCCGAG
ATAGGTTTGA TGAAGAGCAC CGAGCAGCTC TCCAGCCTGG AGATGATGGC TATCGATCCC
CTGCGTCAGG TGATCGCGCC GCGCTTCTGG GCCGGGGTGA TCAGCCTGCC GTTACTGGCT
CTGATGTTTA CCGCCGTGGG CATCTATGGC GGCCATCTGG TCGGGGTGGA ATGGAAGGGG
ATCGACAGCG GTAGCTTCTG GTCTATCCTG CAGGCCTCGG TAGAGTGGCG TCAGGACATA
GTGAACTGTC TGATCAAGAG CCTGGTATTT GCCGTAGTGG TGACTTGGAT AGCCCTGTAT
CGCGGCTATC ATGTGATCCC CAATCCCGAG GGGATCAGCC GGGCGACCAC CCAAACCGTG
GTGCAGTCCA GCTTGGCGGT ATTGGCGCTG GACTTCCTGT TGACGGCCAT GATGTTTGGC
CGCTGA
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| Protein sequence | MSVIDQIARL GRGAIDSVTG LGRAGLMLWG AIAKIPRVRK GTPLLIKQLY VIGVQSMVII
LVSGLFIGMV LALQGYNILV GFGTEDSLGP MVALSLLREL GPVVTALLFA GRAGSALTAE
IGLMKSTEQL SSLEMMAIDP LRQVIAPRFW AGVISLPLLA LMFTAVGIYG GHLVGVEWKG
IDSGSFWSIL QASVEWRQDI VNCLIKSLVF AVVVTWIALY RGYHVIPNPE GISRATTQTV
VQSSLAVLAL DFLLTAMMFG R
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