| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3284 |
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| Symbol | rpsF |
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| ID | 4921120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3926598 |
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| End bp | 3927005 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164896 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001095409 |
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| Protein GI | 127514212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0114214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000227969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAAATCGT ATTTTTAGTT CACCCTGATC AGAGTGAACA AGTGCCAGGT
ATGATCGAAC GTTACACGGG TATCCTTACC CAAGCTGGCG GTCAAATCCA CCGTTTAGAA
GACTGGGGCC GTCGTCAACT GGCTTACCCA ATCATCGAAC TGCATAAAGC TCACTATGTT
CTGATGAACG TAGAAGCGAC TGCAGAATCG GTTGAAGAGC TAGAAACAGC TTTCCGTTTC
AACGACGCTG TTCTTCGTAG CATGGTTATG CGTACCAAGG GTGCCATCAC CGAAGCTTCT
CCAATGGCTA AAGCGAAAGA CGAGCGTGAA GCACGTCGTT CTAGCGAAGA GCGTTCAGCT
GTAGAAGCTG AAGTATCTGA AGAAGCCGCT GAAAACGCAG CAGAGTAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPG MIERYTGILT QAGGQIHRLE DWGRRQLAYP IIELHKAHYV
LMNVEATAES VEELETAFRF NDAVLRSMVM RTKGAITEAS PMAKAKDERE ARRSSEERSA
VEAEVSEEAA ENAAE
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