Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3282 |
Symbol | rpsR |
ID | 4921118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3926044 |
End bp | 3926271 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640164894 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001095407 |
Protein GI | 127514210 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0561913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000203056 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CTGCAGAAGG CGTTACTGAG ATCGATTACA AAGATATCGC TACTCTAAAG AACTACATCA CTGAAAGTGG TAAAATTGTT CCTAGCCGTA TCACTGGTAC AAACGCTAAA TACCAACGTC AACTGGCTCG CGCTATCAAG CGTGCTCGTT ATCTTTCTCT ACTGCCTTAC ACTGATCTAC ATCAGTAA
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Protein sequence | MARYFRRRKF CRFTAEGVTE IDYKDIATLK NYITESGKIV PSRITGTNAK YQRQLARAIK RARYLSLLPY TDLHQ
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