| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3281 |
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| Symbol | rplI |
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| ID | 4921117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3925564 |
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| End bp | 3926016 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164893 |
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| Product | 50S ribosomal protein L9 |
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| Protein accession | YP_001095406 |
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| Protein GI | 127514209 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0359] Ribosomal protein L9 |
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| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000210385 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACGTTA TTCTACTTGA TAAAATCGCT AACCTAGGCA ACCTGGGTGA CCAAGTGTCA
GTTAAAGCTG GTTATGCTCG TAACTTCCTT TTACCTCAAG GTAAAGCGGT AGTTGCTAAC
GCTGCTAACA CTGAAGTATT CGAAGCACGT CGTGCTGAAC TAGAAGCTAA GCTAGCTGCT
GAACTAGCAA CTGCTACTGA GCGCGCTGAG AAGCTGGCTG CTCTTGAAGC TGTTGTTATC
GCTTCTAAAG CGGGCGACGA AGGCAAGCTG TTCGGTTCAA TCGGTAACCG TGACATCGCT
GATGCAGTAA CTGCTGCTGG CGTTGAACTG GCTAAGAGCG AAGTTCGTCT TCCACTAGGT
GCTATCCGCG CTACTGGTGA ATTCGAAATC GACGTTCAGC TTCACGCTGA AGTTAAGGCT
GTTGTTAAGC TTTCTGTTGT TGCAGAAGAC TAA
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| Protein sequence | MNVILLDKIA NLGNLGDQVS VKAGYARNFL LPQGKAVVAN AANTEVFEAR RAELEAKLAA
ELATATERAE KLAALEAVVI ASKAGDEGKL FGSIGNRDIA DAVTAAGVEL AKSEVRLPLG
AIRATGEFEI DVQLHAEVKA VVKLSVVAED
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