| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3278 |
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| Symbol | |
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| ID | 4921114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3921215 |
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| End bp | 3922621 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164890 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_001095403 |
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| Protein GI | 127514206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000542812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000295185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCACAGC AAGGTGGATT TCAGGCTAAG AAAAAGCCTA GAGATATACA GATCGATGCA
TTGAAGATGC CGCCCCATTC GATTGAGGCC GAGCAGTCTG TGCTCGGTGG CTTGATGTTG
GATTCAGATG CCTGGGATAA GGTGGCCGAG GCCGTGGTGA AGGATGACTT CTACTCCCGC
TCCCACAAGA TGATCTTTAC CGCCATGGAG GCCCTGGTGG CCGCGGGTCA GCCGATCGAT
CTGATCACCG TCTCCGAACA GCTTGAGCTG GAAGACAACT TAGAAGATGC CGGTGGTTTC
GCCTATTTGG GCGAGATCGC CAAGAACACC CCGAGCGCGG GCAACATTCT CTCCTACGCC
GCCATCGTGC GCGAGCGCGC CGTGGTGCGT GAGATGATCA AGGTAGCCAA CGAGATCGCC
GATGCCGGCT TTAACCCCGA GGGGCGTAAC TCCAGCGAAC TGCTGGATCT GGCCGAGAGC
AAGGTATTTA AGATCGCCGA GCAGCGCGCT AACGCCAACG AGGGCCCCGA GGGGATCAAG
ACCATCCTCG AGAAGACGGT GGATAAGATC GAGGAGCTGT ACAATAACCC TCACAACGGT
GTGACCGGGG TGTCCAGCGG CTTCAACGAT CTCGACCGCA TGACCGCGGG TTTCCAGTCG
GGCGACTTGA TTATCGTCGC GGCGCGTCCC TCTATGGGTA AGACCACCTT CGCCATGAAC
CTGTGTGAAC AGGCGGCGCT GCACGAAGAC AAGCCAGTGC TCATCTTCAG CTTGGAGATG
CCCTCGGAGC AGATCATGAT GCGTATGCTG GCTTCTCTGG GCCGGGTGGA TCAGACCAAG
ATACGTACGG GTCAGCTCGA CGATGACGAT TGGGCGCGTG TCTCCTCCAC CATGGGGATC
ATGCTGGAGC AGGGCAAGAT GTATATCGAC GATGGCTCGG GCCTGACACC GACCGAGGTG
CGCAGCCGCG CCAGACGTAT CGCCCGCGAA TATGGCGGTC TGTCGATGAT CATGATCGAT
TACCTTCAGC TGATGCAGGT ACCCGCTCTG TCCGATAACC GTACCCTGGA GATCGCCGAG
ATCTCCCGCT CGCTCAAGGC GCTGGCGAAA GAACTCGAGA TCCCGGTGAT CGCCCTGTCG
CAGCTCAACC GCTCTCTGGA GCAACGCGCC GACAAGCGCC CGGTAAACTC CGACTTGCGT
GAATCTGGCT CTATTGAGCA GGATGCGGAT TTGATCATGT TTATTTATCG TGATGAGGTG
TATAACGACG ACTCCGAAGA TAAGGGCACC GCGGAGATCA TCATAGGTAA GCAGCGTAAC
GGCCCCATCG GCCGGGTACG TTTGACCTTC CAGGGCCAGT TCTCCCGTTT CGATAACTAC
GCCGGTCCGC AGTTCGAAGA AGATTAA
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| Protein sequence | MSQQGGFQAK KKPRDIQIDA LKMPPHSIEA EQSVLGGLML DSDAWDKVAE AVVKDDFYSR
SHKMIFTAME ALVAAGQPID LITVSEQLEL EDNLEDAGGF AYLGEIAKNT PSAGNILSYA
AIVRERAVVR EMIKVANEIA DAGFNPEGRN SSELLDLAES KVFKIAEQRA NANEGPEGIK
TILEKTVDKI EELYNNPHNG VTGVSSGFND LDRMTAGFQS GDLIIVAARP SMGKTTFAMN
LCEQAALHED KPVLIFSLEM PSEQIMMRML ASLGRVDQTK IRTGQLDDDD WARVSSTMGI
MLEQGKMYID DGSGLTPTEV RSRARRIARE YGGLSMIMID YLQLMQVPAL SDNRTLEIAE
ISRSLKALAK ELEIPVIALS QLNRSLEQRA DKRPVNSDLR ESGSIEQDAD LIMFIYRDEV
YNDDSEDKGT AEIIIGKQRN GPIGRVRLTF QGQFSRFDNY AGPQFEED
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