| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3271 |
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| Symbol | |
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| ID | 4921304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3913768 |
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| End bp | 3914934 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164883 |
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| Product | galactokinase |
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| Protein accession | YP_001095396 |
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| Protein GI | 127514199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0153] Galactokinase |
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| TIGRFAM ID | [TIGR00131] galactokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.6391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00131566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGAATA CCGCACAGCG CGCCAATAAA CTTTTTGTGC AGACCTTTGG TACCACGGCC
GATGACCTGT ATCAGGCGCC GGGCCGGGTT AACCTGATCG GCGAACATAC AGATTACAAC
GATGGGTTCG TCCTCCCCGC CGCCATCAAC TTTAGAACCG TTATCGCAGT GAAACAGCGC
GACGACGATA AGTTCCGCGC CGTATCCGAC GCCTTTCCCG GCAAGATCTA CACCTGGCAC
TTCGGCCAGG AGGGTGAGAT GGACCCCAAC GACAGCTGGA TCAATTACCT CAAGGGCTTT
ACCGCGGCGG TATCGGCCAG CGGCCTGCCT GCCAAGGGGA TGGATCTGGC GGTAGTAGGT
AGCGTCCCCC TAGGGGCGGG GCTCTCCTCG TCTGCGGCAC TGGAGATCGC CTTCGGCACC
GCGCTCAACG ATTGCAGCCA GCTCAGACTA TCGCCTCTGG CGGTGGCCCA GATGGCCCAG
CGCGGCGAAA ACCAATATGT CGGCTGCGCC TGCGGCATCA TGGATCAGAT GATCAGCGCC
ATGGCTCAAG AGGAGCATGC CCTACTGATC GACTGTGAAG ATCTCGACTG CGAGCCAGTG
CCCATACCCG AAAGCCTGAG CCTGATCATA GTCAACTCCA ACGTCCCCCG CGGCCTGGTG
GACAGCGAAT ATAACCTGCG CCGTGAACAA TGCGAGCAGG TCGCCGAGCA TTTCGGCATC
GAGAGCCTAC GTCATCTTGA GCTGCGTACC CTGGAAGGGG CCAAGGATGA GCTGCCGGAG
GTCTGTTACC GCCGGGCGCG CCATGTGCTG AGCGAAAACC GCCGCACCCA GAATGCCGCC
CACGCCCTAG AGGCGGGTAA CATCGCCAAG CTGAGCGAGC TCATGGCCCA GTCGCACCAA
TCGATGCGTG ACGACTTTGA GATCACCGTG CCCGAGATCG ACAAGCTGGT CGAGATCATC
GACGCAGTGG TCGGCGATCG CGGCGGCGTG CGCATGACGG GTGGCGGCTT CGGCGGCTGC
GTCGTGGCTC TGGTGGATCA CGACCTTACC GACGCCGTGG TCGAGGCGGT CGAGCGCCAA
TATCAGGCGG CGACAGGCCT GGAAGCCAGC GTCTACCTCT GCTCGGCGAG CCAAGGCGCC
TCAAGGTTGG ACGAGGAGCT CTACTAA
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| Protein sequence | MSNTAQRANK LFVQTFGTTA DDLYQAPGRV NLIGEHTDYN DGFVLPAAIN FRTVIAVKQR
DDDKFRAVSD AFPGKIYTWH FGQEGEMDPN DSWINYLKGF TAAVSASGLP AKGMDLAVVG
SVPLGAGLSS SAALEIAFGT ALNDCSQLRL SPLAVAQMAQ RGENQYVGCA CGIMDQMISA
MAQEEHALLI DCEDLDCEPV PIPESLSLII VNSNVPRGLV DSEYNLRREQ CEQVAEHFGI
ESLRHLELRT LEGAKDELPE VCYRRARHVL SENRRTQNAA HALEAGNIAK LSELMAQSHQ
SMRDDFEITV PEIDKLVEII DAVVGDRGGV RMTGGGFGGC VVALVDHDLT DAVVEAVERQ
YQAATGLEAS VYLCSASQGA SRLDEELY
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