| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3221 |
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| Symbol | |
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| ID | 4921545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3844542 |
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| End bp | 3845702 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164831 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095346 |
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| Protein GI | 127514149 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0332861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAA CAGCCATAGC CCTGGCGATG ACCAGCTTGC TGAGTAGCAG CGCCTTCGCC
GCTCTGGATC TCGAAGAACT GCGCCTCCCC AAGGCAACCC AGGCCATGCC CGACGTCGTC
AACCGCTATC AAGCCCTGGT CGATAGCTTG GACGACAAGT ATCGTCAGCA GAAAGATGAA
CTCATCATGA CACAGATGGT GGCCCACCAA GGCGAGCGCC TCTGGCAACA GGCCGTGAGA
GACGTGCAAT CCGGCGGTCA GGACGACAGA TCCCTCTACT GGAGTCGTCT GGCGATGAAG
AAGACCCTTA AAGAGTCTAA GCCCGCCTTT AACATGGCCG ACTGGCAGCG CAGCATATTA
CTCAAGGCGG TAGAGAAATC TTCCCGCGGC TTCAGCGACA TCCACTTCGA TGACGACAGC
CAGATCCGTA TTCTGCTCAC CGGCTTCGAT CCCTTCTTTC TGGATCGCAA CATAGATCAG
AGCAACCCAT CTGGCTTAAC CGCGCTGGCC CTGGACGGCT ACAAGTTTAG CGTCGACGGC
AAGAAGGCCC AGATAGAGAC GGTAATGATC CCGGTGCGCT TCGCCGACTT CGATCAGGGG
ATCATCGAGT CCCTGCTCAC CCCTGTCTAT CGTGAAAACA GCGTCAATGC CATCTTCACC
GTCAGCATGG GCCGTGACGA CTTCGATCTG GAGCGCTTCC CCGGCCGCAA CCGCAGCGCG
GCAGCACCCG ATAACCTCAA TGTGCTGACC GGCGCCACGG CCCAGTCACC ACAGGCGCCT
ATGTTCGATG GCAAGCCACT CTATGGCCCA GAATTCGTCG AGTTCTCGCT ACCTGTCGGT
GCCATGCAGT CGGTCAAGGG CAAGTGGAAG ATCAATGACA ACCACACAGT GACCACGCTA
TCGAGAGGCG AGTTCGACGC CAGCTCGCTG AGCGAGCTGC AAAACACGAC TCAGGTCAAT
GGCTCGGTCA ATGGCTCGGG CGGCGGTTAC CTGTCCAACG AAATCTCCTA CCGCGCGGTG
CTTCTGGGAC AGCGTTTCAA CAGCGGCATC AAGGTCGGTC ATATCCACAC CCCAAGGGTG
AAGGCCTATG AGGCAGAGAC GGAGATGGCG ATCGTTGATC AGGTCAAGGA GATGGTCAAA
GCCGCAGCAA CCCGGCTATA A
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| Protein sequence | MRKTAIALAM TSLLSSSAFA ALDLEELRLP KATQAMPDVV NRYQALVDSL DDKYRQQKDE
LIMTQMVAHQ GERLWQQAVR DVQSGGQDDR SLYWSRLAMK KTLKESKPAF NMADWQRSIL
LKAVEKSSRG FSDIHFDDDS QIRILLTGFD PFFLDRNIDQ SNPSGLTALA LDGYKFSVDG
KKAQIETVMI PVRFADFDQG IIESLLTPVY RENSVNAIFT VSMGRDDFDL ERFPGRNRSA
AAPDNLNVLT GATAQSPQAP MFDGKPLYGP EFVEFSLPVG AMQSVKGKWK INDNHTVTTL
SRGEFDASSL SELQNTTQVN GSVNGSGGGY LSNEISYRAV LLGQRFNSGI KVGHIHTPRV
KAYEAETEMA IVDQVKEMVK AAATRL
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