Gene Shew_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3204 
Symbol 
ID4921562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3822388 
End bp3822966 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content58% 
IMG OID640164814 
Productcytochrome B561 
Protein accessionYP_001095329 
Protein GI127514132 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG AAAATATGCG GGAGATCCCC GTATGGGATC TGTTTATTCG TCTGTTTCAC 
TGGTCCTTGG TGCTGCTGTT TACCCTGACT TATCTCACCG AGGGTGAGGA TGAATGGATG
CTGGTGCACA GCTACGGCGG CTATATCATC TTAGGTATAT TGGCGCTACG TATTATCTGG
GGGCTGGTGG GAACTCGATA TGCCAGATTC AGCAGTTTTG TCAGACCTCC GGCCCAGGCG
ATGGAGTATC TTAAGCAGCT CTTCGCCGGC AGGGCTAAAG ACTATCTGGG ACATAATCCT
GCCGGCGGCC TGATGATAGT GGCGCTGATC GTCTGCGTCT CGCTGACGGC GCTGACCGGC
ATGGCGCTCT ACGCCACCAC AGGCCATGGC CCGTTGGCCG CCACCTTTGT GGCCACCTGG
CCCGATGGGG CGCTGGAGGA GGTGCATGAG TTTTTCGCCA ACTTTAGCCT GACGCTGATT
GTGGTGCATA TCGCCGGGGT GATTGTCGGC AGCCTGGCCC ACAGGGAGAA TCTGGTGCGG
GCCATGTGGA CCGGCAAGAA GCGCAGGCCG CTGCCTTAG
 
Protein sequence
MTQENMREIP VWDLFIRLFH WSLVLLFTLT YLTEGEDEWM LVHSYGGYII LGILALRIIW 
GLVGTRYARF SSFVRPPAQA MEYLKQLFAG RAKDYLGHNP AGGLMIVALI VCVSLTALTG
MALYATTGHG PLAATFVATW PDGALEEVHE FFANFSLTLI VVHIAGVIVG SLAHRENLVR
AMWTGKKRRP LP