Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3188 |
Symbol | |
ID | 4921578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3796157 |
End bp | 3797344 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164798 |
Product | aromatic amino acid permease |
Protein accession | YP_001095313 |
Protein GI | 127514116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.497864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGGCT CTATTGCCAT CGTTGCGGGG ACCGCAATTG GGGGAGGCAT GTTGGCCTTG CCTCTGGCAA CTGCTTCACT GGGGACGATT CCAGCCTTAC TACTATTAGT GGCGATCTGG GGGGTATCTA TCTATACCTC TCTGTTGATG TTAGAGATTA ACTTACGTGC CGGTGTGGGG CTGAACGTCC ACGCCATCAC GGGCAAGACC TTAGGCAAGG TCGGCCAGCT GATCCAGGGC GGCTCCTTCT TGAGTCTGCT GTTTGCCCTG ACCATGGTCT ATCTGATGGG CGGTTCCTCC CTGCTGGAGT CTCGCTTCGA ACCGCTGGGG ATAAAGGTGA ACCACGAGGC GGCGGTACTC ATCTTTACCT TGGTGTTCGG TGGCTTCATC GCCATCGGCG TCTCCTGGAT CGACAAGGTC TCACGTGTGC TCTTTAGCGC CATGGTAGCC CTGTTTGTCA TCGTAGTGCT CTTCCTGCTA CCCGAAGTCA GCCCAAGCTA TATCCTGCGT GAATCGGCCA CCGAATTGGT GTCTAAGGGC GAGCTGGGTA ACCTCTGGCT GGCGGCTATT CCTGTGGTGT TTACCTCTTT CGGTTTCCAC GTCTGTATCG CAACGATTGT GCGCTACCTG GATGGCGATG CCATGTCGCT GCGTAAGGTA CTCATGATTG GCTCGACCAT CCCCTTGGTG TGCTACATCC TCTGGTTGAT GGTGACCCTG GGCACTGTGG GCGGCGCGAC CGTGTACGGT TTCGAGGGCT CTCTGCCTAA GCTGGTGTCG GCGCTGCAGG GTATCGCTCA CTCAGACATT TTACGTCAAT GTATCGATTT GTTTGCAAAC CTGGCGCTGA TAACCTCTTT CCTCGGGGTG ACCATGAGCC TGTTCGACTA TATTGCCGAG CTGACCCGCG CCAGAGACAA CCTGCTGGGT CGCCTGCAGA CCTGGTTGAT AACCTTTGTG CCGCCACTGC TGTGCGCCCT CTACTATCCT GATGGTTTCA TTAAGGTATT AGGTTTCGCG GCTCTGCCGT TGGTGGTGAT GATCATCTTC CTGCCTATCG CCATGGCGCT GGGACAGCGT AAGCAAAATC TGGGCGGTTA CCAGGTGAGT GGTGGTCAGT TTGCATTAGC CGCGTCGGCG CTGGTAGGTC TGGTGATTAT CGCCGCCCAG CTCTGGGTTG CGCTGTAA
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Protein sequence | MLGSIAIVAG TAIGGGMLAL PLATASLGTI PALLLLVAIW GVSIYTSLLM LEINLRAGVG LNVHAITGKT LGKVGQLIQG GSFLSLLFAL TMVYLMGGSS LLESRFEPLG IKVNHEAAVL IFTLVFGGFI AIGVSWIDKV SRVLFSAMVA LFVIVVLFLL PEVSPSYILR ESATELVSKG ELGNLWLAAI PVVFTSFGFH VCIATIVRYL DGDAMSLRKV LMIGSTIPLV CYILWLMVTL GTVGGATVYG FEGSLPKLVS ALQGIAHSDI LRQCIDLFAN LALITSFLGV TMSLFDYIAE LTRARDNLLG RLQTWLITFV PPLLCALYYP DGFIKVLGFA ALPLVVMIIF LPIAMALGQR KQNLGGYQVS GGQFALAASA LVGLVIIAAQ LWVAL
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