| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3187 |
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| Symbol | |
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| ID | 4921682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3793777 |
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| End bp | 3795933 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164797 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095312 |
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| Protein GI | 127514115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.828747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TACTCGTGTC AGTGGCGCTC GCCGCTGCCT TCGGCGCTCA CGCCGATGAG
GGGATGTGGC AGCCCTATCA ACTGCCTGCC ATGGCAGATG AGCTGAAGGC CAAAGGGCTG
GAAATCGACG CCAAATCTAT CTCTAAACTC ACCGAATTCC CCATGAACGC CGTGATCAGC
CTAGGTGGCT GTACCGCGTC GTTCGTGTCG CCAAAGGGCC TGGTAGTGAC TAACCACCAC
TGTGCCTACG GCTCGATTCA ATACAACTCG ACTCCAGAGA AGAACCTGCT AAAAGATGGC
TTCCTGGCGA AGAACTACGG CGAAGAGCTA CCCGCTACCC CAGGTTCACG CATCTATGTC
ACCGAAGCCG TGACCAATGT GACCGGTGAG GTGAAAGCCG GCCTGGAAAA CAAGGTAGGC
AACGACTTCT ATCAGGGCAT CGAAGCCAAA GAGAAGCAAC TGGTTGCCCA GTGTGAGGCA
GATGATGGCT ACCGCTGTCA GGTTTACAGC TTCCACGGCG GCCTGGAATA CTATCTGGTT
AAGCAGCTTG AGATCCGCGA CGTGCGTCTG GTGTATAACC CGGCGGCTAG CGTAGGTAAA
TACGGCGGCG ACATCGACAA CTGGATGTGG CCACGTCATA CCGGTGACTT CTCTTTCTAT
CGCGGCTATG TGTCAAAAGA TGGCAAGCCT GCTGATTTCA GCAAAGACAA CGTGCCTTAC
GAGCCTAAGA GCTTCCTTAA GGTGTCTGCC AAGGGCGTGA GCGATGGCGA CTTCGTCATG
GTTGCCGGCT ACCCGGGTCG CACCAACCGT TACCGCACCG CCAACGAGGT GGAAAACCAG
TTTGAGTGGG CCTATCCGGA AGGCAAGATG CTGCGTGAAC GCTTCATCGA GATCATCAAG
GAAACCGCGC CTGAGGGCAG CGACGAGCGC ATCAAGTATG AGAGCCTGAT CGCCGGTCTG
GCCAACTACG CCAAAAACTT CACCTCGATG ATCGAGTTCT ATGGCAAGTC GACCATGCTC
GACGATCGCA AGGCTCGCGA GGCGGCGCTG ACTGCCTGGA TCAATAAAGA CAGCAAGCGT
CAGGCCCAGT ATGGTCAAAC CATGGCCGAG CTAGACAAGC TGATCAAAGA GAGTCAGGAG
CATCAGGCTC GCGACATCAT CTTAGGTTAT ATCGGTTACA CCACTATGCT GCCGACTGCC
CGTAGCCTCT ACCGTCTGGC TAACGAGAAG CAGCTGGACG ACATGGCGCG TGAGCCTGGT
TATCAGGATC GCGACATGAC CCGCTTCAAG TCGGGCCTTG AGCGTATCGA CCGTCGTTAT
GCACCGAGTG TGGATAAGGC CGTGGTACTG GATCTGCTGA GCCGTTACGC CAAGCTGCCT
AGCGAAGAGC GTATCCCTGA GCTGGACAAG GCATTCGGCA TCGGCAAGAA GTTCGACGCC
GCCAAGCTGA GCAAGGTACT GGATAAGATG TACGCCAAGA CCGAGTTGGG CGACAAGGCG
ACTCGTCTTG CCTGGATGGA CAAGTCGGTA GCCGATTTCA AGGCCTCTAA AGATCCTTTC
ATTCAGTTTG CCGTCGCCAT GTATGACACT GATATGGCCC AGGAGAAGAA AGAGAAGGAG
CTGTATGGCA AGTTGATGAA GGTGCGTCCT CAATATATGG ATGCCATCAT CGCCTACAAC
AAGGAGCTGG GTAAGCCGGT GTACGCCGAC GCCAACTCTA GCCTGCGTGT GACCGTGGGT
CATGTGAAGG GCTACTCGCC ACAAGATGGT CTGGTTGCCG TACCTTTCAC TCGCCTGGAA
GGCATAGTGG CTAAAGACAC GGGTGAAGAT CCGTTCGACG CGCCTAAGAA GCAGCTTGAG
CTGATCAAGC AGAAGCAATA TGGTGACTAC TATGTGAAAT CTATCGACTC TGTGCCGGTG
AACTTCCTGT CGACCCTGGA TACCACAGGT GGTAACTCAG GTTCACCAAC CCTCAACGGC
CGCGCCGAGC TTGTTGGCTT GCTGTTTGAC GGCGTCTATG AGTCAATCAT CGGCGACTGG
GGTTACGATA CCGACACCAA CCGTTCTATC CAGGTAGATA GCCGCTACAT GCTATGGGTG
ATGAAGTATC TGGATCACGC CGACAACCTG CTGGCAGAAA TGGAGATTGT TCACTAA
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| Protein sequence | MKKLLVSVAL AAAFGAHADE GMWQPYQLPA MADELKAKGL EIDAKSISKL TEFPMNAVIS
LGGCTASFVS PKGLVVTNHH CAYGSIQYNS TPEKNLLKDG FLAKNYGEEL PATPGSRIYV
TEAVTNVTGE VKAGLENKVG NDFYQGIEAK EKQLVAQCEA DDGYRCQVYS FHGGLEYYLV
KQLEIRDVRL VYNPAASVGK YGGDIDNWMW PRHTGDFSFY RGYVSKDGKP ADFSKDNVPY
EPKSFLKVSA KGVSDGDFVM VAGYPGRTNR YRTANEVENQ FEWAYPEGKM LRERFIEIIK
ETAPEGSDER IKYESLIAGL ANYAKNFTSM IEFYGKSTML DDRKAREAAL TAWINKDSKR
QAQYGQTMAE LDKLIKESQE HQARDIILGY IGYTTMLPTA RSLYRLANEK QLDDMAREPG
YQDRDMTRFK SGLERIDRRY APSVDKAVVL DLLSRYAKLP SEERIPELDK AFGIGKKFDA
AKLSKVLDKM YAKTELGDKA TRLAWMDKSV ADFKASKDPF IQFAVAMYDT DMAQEKKEKE
LYGKLMKVRP QYMDAIIAYN KELGKPVYAD ANSSLRVTVG HVKGYSPQDG LVAVPFTRLE
GIVAKDTGED PFDAPKKQLE LIKQKQYGDY YVKSIDSVPV NFLSTLDTTG GNSGSPTLNG
RAELVGLLFD GVYESIIGDW GYDTDTNRSI QVDSRYMLWV MKYLDHADNL LAEMEIVH
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