| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3174 |
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| Symbol | |
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| ID | 4921669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3778538 |
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| End bp | 3779500 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164784 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095299 |
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| Protein GI | 127514102 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC AGTCCATCAT CCCTAAGGCG ATCACCGAAT ACGATCTCAG ATTACTGCGC
ATCTTTCGCA CCGTGGTCGA GAATGGTGGC TTCGCCGCCG CAGAGAATGA ACTCGGGGTC
ACCCGCTCCA CCATCAGCGT GCATATGTCC AACCTTGAGA GTCGCATGAA GCTCAAGCTG
TGTAGCCGGG GACGGGGCGG ATTTGCCCTC ACGGAGGCGG GCCAGGCCGT GTATCACGCC
TGCATCGAAC TATTCGATTC CCTCAACGAT TTCTCGATGT TTGTTAACAA CTTGGGGGAA
GAGTTGATCG GCGAACTGGT GATCCTCTGC GCCGATCAGC TGGACTACGG CATGCAGCAG
AAGCTGGCCC AGGTGATCGC CTACATACAC GAGCGTCAGC CCCAGCTGCA CCTGATTCTT
GATGGCGAGG CGCTGCACCA GATAGAGAAG TCGCTGCTAC AGGACAAGGC CCATGTCGGC
CTCTTACCCA GCTATCAACA GATCCAGGGC CTCAACTATC AGACCATCTT CAGCGAGCCC
ATCTACCTGT GTTGCAGCGC CAAGCATCCC TATTTTCATC TGAGCGACAA AGAAATCAGC
GCCGAGATGC TGGCCAAGAC CCCCTCTATC CACCCAGGTG TCGATATAGA CCCCGAGGGC
AGAGAGCAGC TCAAACGCCT CAACCTGTCG GCCAAGGCGT ATCAGTTTGA TACTCGTAAA
ACCTTAATTC TATCGGGTTG CTACATAGGT TACCTGCCCC TGAGCTACAT TCAGGAGGAG
CTGAAACAGC AGGAGATCAA GATCATTCAC GGGGATGAGG CCTGTTACCA GTTCAACCTC
TCCATGGTGG TCAAGCAGTC GGCGCGTGAG AGCGCCAAGG TAGAGCTGCT GACCCAGGCC
TTCAATGAGG TGTTTGGCCT AGAGCCGGGC AGTGAATCAA AAAAGGCTGC GGCCACACCT
TAG
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| Protein sequence | MSKQSIIPKA ITEYDLRLLR IFRTVVENGG FAAAENELGV TRSTISVHMS NLESRMKLKL
CSRGRGGFAL TEAGQAVYHA CIELFDSLND FSMFVNNLGE ELIGELVILC ADQLDYGMQQ
KLAQVIAYIH ERQPQLHLIL DGEALHQIEK SLLQDKAHVG LLPSYQQIQG LNYQTIFSEP
IYLCCSAKHP YFHLSDKEIS AEMLAKTPSI HPGVDIDPEG REQLKRLNLS AKAYQFDTRK
TLILSGCYIG YLPLSYIQEE LKQQEIKIIH GDEACYQFNL SMVVKQSARE SAKVELLTQA
FNEVFGLEPG SESKKAAATP
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