| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3171 |
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| Symbol | |
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| ID | 4921948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3774643 |
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| End bp | 3775407 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164781 |
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| Product | prolipoprotein diacylglyceryl transferase |
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| Protein accession | YP_001095296 |
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| Protein GI | 127514099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
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| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCTG TGTTGGTCTC TTTCATGGGG CTGACGATAC ATTGGTATGG CGTCCTGTTT
GCTAGCGCGA TCTTCGCGGG CTTTCAGGTG ATGAAACGCA TCTATGTGCG CGAAGGCCTG
GATGTGGAGT CACTGGATAA CCTCTTGATC TACTGCGTTA TCGGCATAGT GGTGGGCGCG
CGTCTGGCCC ATGTGTTGTT TTACGATCCC AGCTACTACT TCGCGCACCC GGCTAAGATT
CTGGCGATCT GGGAAGGCGG CCTGGCCAGC CATGGCGGCG GCCTGGGGGC GATCCTGGCG
CTCTACTATT ATCATCGCAA GATGAAGCTA CCTTTCCTCT TCCTGCTGGA TCGGCTGGCG
ATCGCCACGG CCATCTTCGG CTTCTTCGTG CGCATGGCCA ACTTCGTCAA TTCTGAGATC
CTCGGGGTGC CGAGCGACAA GCCCTGGGCC ATCGTCTTCG AGCGGGTGGA CATGTTGCCG
CGCCATCCGG CCCAGCTGTA TGAGGCGCTG GCCTACCTGA GCATCTTCAT CGCCCTTTGG
GCTATCTACA AGACCACAGA GATGAAGCAG AAGCAGGGCG CCCTGTTCGG CCTCTTCCTG
GTGTGGGTGT TCAGTGCCCG TTTTGCCATA GAGTTCGTCA AGGTGAAGCA GGCGGCGTAT
GCCCAGGACT GGACCATGAG CGCCGGTCAG ATGCTGAGTA TTCCTTTCCT GCTGGTGGGG
GTCTTCCTGC TGGTGAAACC CTATCTGGCA TCCAAGGCCA AATAG
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| Protein sequence | MDPVLVSFMG LTIHWYGVLF ASAIFAGFQV MKRIYVREGL DVESLDNLLI YCVIGIVVGA
RLAHVLFYDP SYYFAHPAKI LAIWEGGLAS HGGGLGAILA LYYYHRKMKL PFLFLLDRLA
IATAIFGFFV RMANFVNSEI LGVPSDKPWA IVFERVDMLP RHPAQLYEAL AYLSIFIALW
AIYKTTEMKQ KQGALFGLFL VWVFSARFAI EFVKVKQAAY AQDWTMSAGQ MLSIPFLLVG
VFLLVKPYLA SKAK
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