| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3132 |
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| Symbol | |
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| ID | 4921999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3724413 |
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| End bp | 3724901 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164742 |
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| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
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| Protein accession | YP_001095257 |
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| Protein GI | 127514060 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
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| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0394638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.243647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG TCTATGTCGC ACTGGGGGCC AATCTCGCGT CCCCTAAAGC CCAACTGGAT
CAGGCCTGTC AGGCACTGAA GGCCTTGGCA AGCGACGGAC AACTAAGCGT CTCCCCCTAT
TACCAAAGCG CCCCCATGGG TGATGTGCCG CAGCCCGACT ACCTCAATGC CGTGGCTCGC
TTTACCACCA CCATCGCCCC ACTGGCGCTG CTTGATGCCC TACAGGCGAT CGAGAACGAA
CAGGGTCGGG TGCGTGAGGT ACGCTGGGGC GCCAGAACCT TAGATCTGGA CCTGCTCCTC
TATGGCGACT GGCAACTGGA TATCCCGCGT CTTCAGGTGC CGCACTACGG CATGAAGACC
CGCAGCTTCG TGTTGCTGCC CCTATTGGAT CTGGCCCCAG ATCTCATTCT CCCCTGCGGC
ACCAAGCTGA CTTCACTGAT CACCGAGGAA CTTAAGAGAC AAGTTCAACA ACTCGGCCCG
GATCATTGA
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| Protein sequence | MNTVYVALGA NLASPKAQLD QACQALKALA SDGQLSVSPY YQSAPMGDVP QPDYLNAVAR
FTTTIAPLAL LDALQAIENE QGRVREVRWG ARTLDLDLLL YGDWQLDIPR LQVPHYGMKT
RSFVLLPLLD LAPDLILPCG TKLTSLITEE LKRQVQQLGP DH
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