| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3107 |
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| Symbol | |
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| ID | 4922212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3686903 |
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| End bp | 3688060 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164717 |
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| Product | peptidase M19, renal dipeptidase |
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| Protein accession | YP_001095232 |
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| Protein GI | 127514035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.178357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTGC AAATGCAACG ACGTCAGCTA CTAAAAGCCT TGGCCGCTGC CGGTCTGTTA
ACTCAGTTAT CGCCCCTGAA TGGCTGGGCA AAAACCGCAG GGAAGCCCCT CTATATCGAT
GGCCTCTCCT TTTTGCCGGA GGACTTAGCC GATCTCGGCG CGTCAAAGCT CGATGCCTAC
CTGTGCGACA TATCCGCCAT CGAGGCCATA GAACAGGCCG ATGGCACCAC CAACTACAAA
CGCACCTACA ACGCCTGCGT CAAAAGCATC GGCGAGGCCC TAGCCAGGGT AAACGCCAAC
CCAGACAAGC TACTACTAGG GCGTAGCGCC AAGGATATAC AAACGGCCCA TGCCAGCGGC
CGCACCGCCG TCTTCTTCCA GATCCAGGGG GCAGACTGCG TCGAACAGAG CATAAATCAA
GATCTCAACC AGGTGGATGA GTTTTATGAG CGCGGCCTAA GGGTACTGCA GCTTACCCAC
CACTACGGTA ACCGCTTCAG CGGCGGCGCC CTGGACAACG ATGGCAAGCA GGGACTCGAC
CTGCCGCTCA CCAAGGCCGG CCATCAGCTG ATCCACAAGC TCAACAGCAA GCGGATGCTG
ATCGACGTCA GCCACTCCAG CCCTCAATCG GCGCTAGACA GCGCCAAGGC CAGCCGTGCG
CCGATAGTGC AGAGCCATGG CGCCGTGCGC GCCATCGTTA ACCATGCCCG CTGCTCACCC
GACGAGGTAA TCAAGGCAAT TGCCGACACC GGCGGCCTGT TCGGCGTCTT CATGATGACC
TTCTGGCTCA CCACTGAGCA AACGCCCACC ACAGACCACT ACCTGGAACA GCTCAAACAT
GTGGCCAATG TCGGCGGCAT AGACGCCGTG GCGATTGCCA ACGACTACCC GCTGCGGGGC
CACGAGAAGC TCTTGGAACT CAACAACGAC AACGCCGAAG GCGTGAAACA ATATGTCGAG
TGGTGGCATA GCCTGCGAGC CCGCGGCGTA CTAGGCTTCG ACCACGACCC CAAACACGTG
GTGATCCCAG CGCTTAACCA TATCGAGCGC ATGGAGCGTA TCGACAACGC TCTGGCCCGC
GCCGGATTCA GCAGCGGCGA TCGCGCTAAA ATAATGGGCG GGAATTGGCA GAGGGTGTTG
ACCGAGGTAC TAGGCTAG
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| Protein sequence | MPVQMQRRQL LKALAAAGLL TQLSPLNGWA KTAGKPLYID GLSFLPEDLA DLGASKLDAY
LCDISAIEAI EQADGTTNYK RTYNACVKSI GEALARVNAN PDKLLLGRSA KDIQTAHASG
RTAVFFQIQG ADCVEQSINQ DLNQVDEFYE RGLRVLQLTH HYGNRFSGGA LDNDGKQGLD
LPLTKAGHQL IHKLNSKRML IDVSHSSPQS ALDSAKASRA PIVQSHGAVR AIVNHARCSP
DEVIKAIADT GGLFGVFMMT FWLTTEQTPT TDHYLEQLKH VANVGGIDAV AIANDYPLRG
HEKLLELNND NAEGVKQYVE WWHSLRARGV LGFDHDPKHV VIPALNHIER MERIDNALAR
AGFSSGDRAK IMGGNWQRVL TEVLG
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