Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3083 |
Symbol | |
ID | 4922326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3661997 |
End bp | 3663439 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164693 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001095208 |
Protein GI | 127514011 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG ATCTCAGCAG TACAGAGAAC CCAATCGCCA CCAAGGCCGC CCTGGGCCAG GCCATCCCCG TGACCAACCT GCCGGTGCAG CGCGGTAAGA TACACATAAA AGAACAGAAG GGGCGCTTTC AGCGTCTGCG CACCGGCCTC AATAGCCTGC TGATCCTCTT CTTTTTCCTG TTACCCTTCA TCCCCTATCA GGGACGCCAG GCGATCCTCT TGGATGTGGA GCGCCAGGAA TTTCACTTCT TCAACCTGAC CCTGTGGCCG CAGGATTTCA CCCTGCTGGC CTGGCTGTTT ATCATCGCCG CCTTCGCCCT CTTCTTCGTC ACCGTCTTCT GGGGACGCGT CTGGTGTGGC TACCTCTGCC CTCAGACCAG CTGGAGCTTC GCCTTCGTCT GGATAGAGCG GCAGATTGAG GGCAACAGCA ACAAGCGTCA CGCCCTGGAT AAGGCTCCCT GGAGTCTTGA GAAGGTGCTT AAACGCGGCG CCAAGCATCT GGCCTGGGCA CTAGCGGGGC TGATCACCGG CTGTGGTTTC ATCGCCTACT TCATCCCGGC CAGCGAGCTC TATCCACAGA TCTTTACCCT AAGCGCCAGC TTCTGGGTCA CCGCCTGGGT CTGGTTCTTC GCCCTGTGTA CCTACCTCAA CGCAGGCTGG ATGCGTGAGC AGATGTGTCT GCACTGCTGT CCCTACGCCC GCTTTCAGTC GGCCATGTTC GACGCCAATA CCCTGACCGT CTCCTATGAC GCCGCCCGCG GCGAGTCTCG CGGCCCGCGA AAACGCAAAC AGGCTACCGA TCTCGGCGAC TGCGTCGACT GTAATCTGTG TGTCGATGTC TGCCCCACAG GGATAGATAT TCGTAACGGC CTGCAATATG AGTGCATCAA CTGCGGTGCC TGTGTCGATG CCTGCGACCA GACCATGGAT AAATTCGGCT ATGACAAGGG CTTGATCCGC TACGCCAGCG AGAACGAGCT GCAGAAGAAG GAAGTAAAAC GTTTTACCTC CTTCAAGTTT GTCGGTTATG GCATCGCGGT GATCATCATG CTCAGCGTGT TCGCCCTGGA TCTCTATCGT CACCAAAGCA TAGATCTCAA CGTCATCCGC GACCGCCAGA GCCTCTACCG CGAGGTGGGT GACGGCCGCA TCGAAAACAG CTACACCCTG AAGATCCGCA ACAAGACCCA GCAGGATCAT CAGTACCTTA TCAGCCTAAA AGACACAGGC AACCACGGCT TCGCCAAGGA GACCTCACAG CAGGTGTTGA TCAAGGCTGG TGAGCAGCTG AGCTATCCGG TAACGGTGTT CGAGCAGAAG CAGGCGGACT TTGTCGGCGC CAAGCTGCAG AAACAGACCA TCGCCTTTAC GGTCACCAAC CTGAGTAACC CCAAGGAGAA GGTCTCCCAG GCCAGCCCCT TCTTTAGCCT GAGCGCCTTC TAA
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Protein sequence | MSQDLSSTEN PIATKAALGQ AIPVTNLPVQ RGKIHIKEQK GRFQRLRTGL NSLLILFFFL LPFIPYQGRQ AILLDVERQE FHFFNLTLWP QDFTLLAWLF IIAAFALFFV TVFWGRVWCG YLCPQTSWSF AFVWIERQIE GNSNKRHALD KAPWSLEKVL KRGAKHLAWA LAGLITGCGF IAYFIPASEL YPQIFTLSAS FWVTAWVWFF ALCTYLNAGW MREQMCLHCC PYARFQSAMF DANTLTVSYD AARGESRGPR KRKQATDLGD CVDCNLCVDV CPTGIDIRNG LQYECINCGA CVDACDQTMD KFGYDKGLIR YASENELQKK EVKRFTSFKF VGYGIAVIIM LSVFALDLYR HQSIDLNVIR DRQSLYREVG DGRIENSYTL KIRNKTQQDH QYLISLKDTG NHGFAKETSQ QVLIKAGEQL SYPVTVFEQK QADFVGAKLQ KQTIAFTVTN LSNPKEKVSQ ASPFFSLSAF
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