Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3065 |
Symbol | |
ID | 4922665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3640696 |
End bp | 3641904 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164675 |
Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
Protein accession | YP_001095190 |
Protein GI | 127513993 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0203848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGTA CACAAACCTA TGACGTTGCC ATCATCGGCG GAGGCATGGT CGGGCTGGCA ACCGCCATCG GCCTTGGGCA GGAAGGGCTG AGAGTCGTGG TGATCGATGC CGGCGAAACC CAGGCGGTAT CCGGTGAGGC CAGATTAAGA GTCAGCGCCA TCAACAAGGC GAGTCAGCGA TTACTTACCC ATCTGGGGGC CTGGGCCTAT ATCGACGAGT CTCGCGTCGG CCCCTATCAG AAGATGGCGG TGTGGGATAA GGATAGCTTG GGCAAGATAG GTTTCGATGC TCATTCGATC AGCGAGCAGA CCCTGGGCAG CATCATAGAA AATGACAACA TCAGCCATGC CTTGGCGACC CGTGCCGGTG AGCTAAGTGA AATCACCCAC CTGGAAAATC ACCGTCTGGA GAAGATAGCC TTTGGCGAGC GTGAGGCCTG GCTGACCCTG GATAACGGCG ACAACCTGTC GGCGGCACTG GTGATTGGCG CCGATGGTGC CAATTCCTGG GTGCGCGAGC AGTGCAAGAT CCCTATGACC TTCTGGGACT ATGGTCATCA CGCCATTGTC GCCTCGATCC GCACCGAGCT GCCGCACAAT GCCACCGCCA GACAGGTGTT CTTAAGTGAT GGCCCATTGG CGTTTCTGCC GCTGTTTGAG CCAAGTCTCT GCTCTATCGT CTGGTCCGTG CCTCCTGCCA AGGCGCAGTC GCTGCTGGAG GGGGACAAGG TGCAGTTCGA ACGCAGCCTG ACCGCCGCCT TCGACGGTAA GCTGGGCATG TGTACGCTGG AGAGTGAGCC CCAGGCCTTC CCGCTGCGGA TGCGTTATGC CCGTCACTTT GCCCGTCACC GTCTGGTGCT TGCGGGGGAT GCGGCCCACA CCATACATCC GCTGGCAGGC CAGGGGGTTA ACTTGGGCTT CTTGGACGCC GCCGCCATTA TCGAGACCCT GAGCGAACTC AAGGCCAAGG GCAAGGATCT CGGCGATTAT GCCAATCTTC GTCCGTTAGA GCGTTGGCGT AAGGCGGACG CGCTGGAGAT GATCGCGGCG ATGGAGGGCT TCAAGCGGCT GTTCGAAGGC AGTAATCCGG TGAAAAAAGC CCTGCGGGAT CTGGGTCTCA ATCTGGTGGA TAACCTTTCT CCTGTGAAAA CACTGTTTAT GCAACAGGCT ATGGGTAACA AAACCCGCTT GCCTGAGTTG TGTAAATAA
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Protein sequence | MFSTQTYDVA IIGGGMVGLA TAIGLGQEGL RVVVIDAGET QAVSGEARLR VSAINKASQR LLTHLGAWAY IDESRVGPYQ KMAVWDKDSL GKIGFDAHSI SEQTLGSIIE NDNISHALAT RAGELSEITH LENHRLEKIA FGEREAWLTL DNGDNLSAAL VIGADGANSW VREQCKIPMT FWDYGHHAIV ASIRTELPHN ATARQVFLSD GPLAFLPLFE PSLCSIVWSV PPAKAQSLLE GDKVQFERSL TAAFDGKLGM CTLESEPQAF PLRMRYARHF ARHRLVLAGD AAHTIHPLAG QGVNLGFLDA AAIIETLSEL KAKGKDLGDY ANLRPLERWR KADALEMIAA MEGFKRLFEG SNPVKKALRD LGLNLVDNLS PVKTLFMQQA MGNKTRLPEL CK
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