Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3019 |
Symbol | |
ID | 4923070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3584946 |
End bp | 3585968 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640164629 |
Product | zinc carboxypeptidase-related protein |
Protein accession | YP_001095144 |
Protein GI | 127513947 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.266904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGT TCTCCTTCGA GCATGCCTTC GAGATCGATA CCCTAAAGCG GCTGATCGCC CAGCATCAGG CGCATTTTCG GCATCGCTCA CTGCTGGACT TTTATTTCCG CGGCGAGGCG CTGTCGGTGA CCGCCATCGA GCTGGGGGCA CAAGAAAGCG ACGCGCCCTG CGTGCTCTTT GTCGGCGGGG TGCATGGGGT CGAGCGTATC GGCGCCCAGG TGGTGCTGGC GTTTCTCGGC AGCCTGCTTA ACCGTCTCGA CTGGGACACG CACCTGCAGG CGCTATTGAG AAGAGTAAGG CTGGCCTTCG TCCCCATAGT GAATCCGGCG GGGTTCTTGC GCGGCAGCCG TGGCAACGGT CAGGATGTGG ATCTGATGCG CAATGCCCCG ATTGAGGCGC AGGAGGGAGT CACCTTCCTG GTCGGCGGGC AGCGCTTCTC CCGTCATCTG CCCTGGTATC GCGGCGAGGC GATGGCGGCG GAAACCAAGG CCTTGATAGA TTATGTCACC TCGCTACAGG GGCGCAGCAG TAGCCTGCTG GCGCTGGATG CCCACTCGGG CTTCGGGCTC AAGGATCACC TCTGGTTTCC CCATGCTCAC ACCCGCGAAA CTTTTGCCGG CATAGGCTAT GTCTATCAAC TGCATAAGTT GTTTGAGAAG GGCTACCCCC ACCACGGTCA CTATCAGCTG GCGCCCCAGA GCCATTTCTA TCGTACCCAC GGCGACATCT GGGACTATCT GGTGACCCAG GTTGACGGCA AGACCCCCTT CGTACCGCTA ACCTTAGAGA TGGGGTCCTG GGCCTGGGTA CGCAAGAATC CGCGTCAGCT GTTTAACTTT CCCGGCTACT TCAATCCTCA GGCGCCCCAC AGACACCACA GGATCTTGCG TCGTCATGTG GTGTTGATGC AGTTTCTGCT CGACGCCGCC TATGGCAGGG TGCTGGAGCG CCTCTCGCCG TCCGAGCTGT CAATGCTCAC CGCCGAGGGG CAGCGGCTTT GGTTTAATCG AGGAGCAAGA TGA
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Protein sequence | MSRFSFEHAF EIDTLKRLIA QHQAHFRHRS LLDFYFRGEA LSVTAIELGA QESDAPCVLF VGGVHGVERI GAQVVLAFLG SLLNRLDWDT HLQALLRRVR LAFVPIVNPA GFLRGSRGNG QDVDLMRNAP IEAQEGVTFL VGGQRFSRHL PWYRGEAMAA ETKALIDYVT SLQGRSSSLL ALDAHSGFGL KDHLWFPHAH TRETFAGIGY VYQLHKLFEK GYPHHGHYQL APQSHFYRTH GDIWDYLVTQ VDGKTPFVPL TLEMGSWAWV RKNPRQLFNF PGYFNPQAPH RHHRILRRHV VLMQFLLDAA YGRVLERLSP SELSMLTAEG QRLWFNRGAR
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