Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2965 |
Symbol | |
ID | 4924059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3517568 |
End bp | 3518836 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164575 |
Product | putative manganese transporter |
Protein accession | YP_001095090 |
Protein GI | 127513893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAACG TTAGTGTAAA TACAACCCAG ACTAGCCTCT GGCTGCAGTG CCGCCGCTTG TTAACTGCCA CAGGCCCTGG CCTGCTAATG GCGGCCGCGG CCATCGGCGC ATCGCACCTG GTGGCCTCGA CCCGCGCCGG CGCCGAGTTT GGCTGGCAGC TGGCCTGGGT GATACTCCTG GTGAACCTGC TCAAGTATCC CTTCTTTGCC GCAGGGGCCC GCTATACCGC GGCAACCGGT GAGAGCCTGC TGCACGGCTA TCAGCGCCAA GGACGCGGTT ACCTGCTGCT CTTCTCGCTG CTCAACGCCC TGGCGGCGGT GGCCAGCACC GCAGGCGTCG CCATGTTAAC TGCCGCGCTG CTCACCCAGT TTATTCCTCT GCCTATCGAT CTGCTGGCGT TGATCGTCTT GGTCGCCAGC CTATTGCTCT TGGTACTGGG TCATTATCGG GTGCTGGACA GGGTGACCAA GGTGATCATG CTCTGCCTGA CGGTGACCAC CCTGAGCGCC GCCGCGCTGG CCTTTAACGC CGAACCTATT CTGGCGCCTG GCTTCGTGTC GCCTTCCCCC TGGCAGTGGG CTCATGTGGG CTTCCTGGTC GCCATGATGG GTTGGATGCC GGCGCCTATC GAGGTGAGCT GCTGGAACTC CCTCTGGCTT TTGGAAAAGC AGAAACAGCA GCGGGTGACG CCTAAGCAGG CGCTGTTCGA TTTTAATCTG GGCTTCATCA CCACGGCGAT ACTGGCCGTG GTGTTTCTCT CGCTCGGTGC CATGGTGATG CACGGCTCGG GCGTACACTT CTCGCCTTCC GGGGCCAAGT TTGCCGAGCA GTTGATTCAG CTCTATAGCC AGGTGCTGGG GGAGGGGAGC CGCTATCTGA TTGCCCTGGT GGCCCTGCTC TGTATCTTCA GCACCACGGT TACCGTGGTC GATGGCTACA GCCGTACCCT TATCCTGAGT GTGCAGCTAC TGCGAAAGGA TGAGGTCAGC GAGCGCGGCC TCAACCTGAC CATGTTGGCG GTGAGCCTGC TGGGGCTGGG GATCATACTC TTCTTCAAGG GGGCATTGCT GCCACTGCTG CAGTTTGTGA TGACCCTGGC CTTCATGACC ACCATCATCT TCGCCTGGCT CAACTATCGC CTGATGACCA GTGACAATCT GGCGCCCGGC GATCGCTACG GCGTGGCCAT GCGGCTGCTT TCTTGGATCG GCATGACTTA TCTGCTAGGG TTTGCGGCTT TATTTGTCTA CTGGAAGTTT GTCGGTTAA
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Protein sequence | MENVSVNTTQ TSLWLQCRRL LTATGPGLLM AAAAIGASHL VASTRAGAEF GWQLAWVILL VNLLKYPFFA AGARYTAATG ESLLHGYQRQ GRGYLLLFSL LNALAAVAST AGVAMLTAAL LTQFIPLPID LLALIVLVAS LLLLVLGHYR VLDRVTKVIM LCLTVTTLSA AALAFNAEPI LAPGFVSPSP WQWAHVGFLV AMMGWMPAPI EVSCWNSLWL LEKQKQQRVT PKQALFDFNL GFITTAILAV VFLSLGAMVM HGSGVHFSPS GAKFAEQLIQ LYSQVLGEGS RYLIALVALL CIFSTTVTVV DGYSRTLILS VQLLRKDEVS ERGLNLTMLA VSLLGLGIIL FFKGALLPLL QFVMTLAFMT TIIFAWLNYR LMTSDNLAPG DRYGVAMRLL SWIGMTYLLG FAALFVYWKF VG
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