| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2938 |
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| Symbol | |
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| ID | 4922140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3477764 |
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| End bp | 3478561 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164543 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_001095063 |
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| Protein GI | 127513866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000804744 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0225241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTATGC GAAACAGTAA CGCCCTGTCA CTGCTCTCCT TCATCCTGCT ATTGGTTTTG
GCGGGCTGCT CGTCGCAGAG CGGCCGCTAT AAGATTGCCG ACGACGTAGC GCCGACCGAT
GCGCCCGATG TCTCCAAGGT CGAAGATGCT CATCCCAAGT TTGAGCCCTA CAGCCGCGGC
GGCAACCGCA AGGAATATAC GGTACTGGGC AAGACCTACC GGGTGCTCGA CACAGGCAAA
GGCTATCAGA AGACAGGCAT CGCCTCCTGG TATGGCGCCA AGTTTCATGG TCACCTCACC
TCCAATGGCG AGACCTACGA CATGTATTCC ATGTCGGCGG CCCATAAGAC GCTGCCACTG
CCAAGCTATG TGAAGGTCAC TAACCTGGCC AACGACAAGT CGGTAGTGGT GAGGGTCAAC
GATCGAGGCC CCTTTCACGA TAACCGCATC ATAGATCTCT CCTACGCCGC GGCGCATCGC
CTGGACATGC TCAAGACGGG CACGGCCAAG GTGCAGCTTG AGGTGATCTA CATCGAAAAT
CCCGAGTCTG TGGCTTTGGC CGCACTGCAG GAAACCAAAC TTCACTATGT GCAGGTGATC
GCCTCCTCAG ATAAGGGGCG CATCGACCAT CTGGCACAGA CCCTGGCCGA TCAGTATCAG
GTGCAGACCC GTATCCAACA GAGCGGCAAT CTCTATCGCC TGCAACTCGG CCCCATAGGT
CGCCAGCAGA TCGCCGCCCA GTTGCATCAG ACACTGCAGC AAAACGGCTA CCCTCAGAGC
TATCTGGTGA CCGAATAA
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| Protein sequence | MLMRNSNALS LLSFILLLVL AGCSSQSGRY KIADDVAPTD APDVSKVEDA HPKFEPYSRG
GNRKEYTVLG KTYRVLDTGK GYQKTGIASW YGAKFHGHLT SNGETYDMYS MSAAHKTLPL
PSYVKVTNLA NDKSVVVRVN DRGPFHDNRI IDLSYAAAHR LDMLKTGTAK VQLEVIYIEN
PESVALAALQ ETKLHYVQVI ASSDKGRIDH LAQTLADQYQ VQTRIQQSGN LYRLQLGPIG
RQQIAAQLHQ TLQQNGYPQS YLVTE
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