| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2937 |
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| Symbol | |
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| ID | 4922139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3476776 |
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| End bp | 3477783 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164542 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001095062 |
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| Protein GI | 127513865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000220956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0240906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACCAG TTTCACAGCT ATTTTTCGCC CTGATGCTGG GCGGTGCCAG CTTGCTGGCC
CAGGCCGATG ATAAGGTGAT CCCCCAAGAG GGTGACATCA GTGAGTTGAA GACAGCCTTC
ACCGAGCAGC AACTCGGCGC CGGCTTCACC CAGGCAGAGA TAGACAGCTT TCTCAGTAGC
GCCCAATACA ACCAGAAAGT GATCGACGCC ATCACCACCC CTTGGGAAGC CAAGCCCTGG
TTTCAATATC ACCCCATCTT CCTCACCGAT AAGCGTCTGG AAAAGGGACT GAATTTCTGG
CGCACCCATG ATGCGACCAT CGCCAAGGCG GCAAAGACTT ATCAGGTAGA CCCCGAGATC
ATCGTTGCCA TTATCGGCAT CGAGACCTTC TACGGCGGCT ACATGGGCAC CTATCCGGTG
ATCGATGCCC TCTACACCCT GGGCTTTCAT TACACGCCGC GGGCCGACTT CTTTCGCAAG
GAACTCGCCC AGCTACAGAC CCTGGCCAAA GAGGAAAAAC TGGACCTGAC TACGCTAAAA
GGCTCCTACG CCGGCGCCAT GGGTTATGGT CAGTTCATTC CCTCCAGCTA TCGTCATTTC
GCGGTGGATT TTAGCGGCGA TGGCCGCCGT GACTTGGTCG GCGATCCGGT TGATGCCATC
GGCAGTGTCG CCAACTACTT TCATCAACAT GGCTGGCAAA AAGGCGGCCT GGTCACCCTA
CCACTGACGA CTCACCATCT GCCCGCGCAT CTCAAGGCCT GGTCGGGAGA GAAGCTCTCC
TACAAGGTTG CCGACATCCT GTCGCCAACC ATCTCCCTGG CGCAGAATGT CGATCTCGAC
GTGCAACAAC CCGCACTACT GGTCGAGCTT GAGCAGCAAG ACGGCAAAGA CTACTGGCTG
GGACTGAACA ACTTTTACGT GATCACCCGC TATAACCGCA GCCCGCTGTA CGCCATGGCG
GTGTATCAAT TTAGCCAACA ACTCAAAGAT GCTTATGCGA AACAGTAA
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| Protein sequence | MKPVSQLFFA LMLGGASLLA QADDKVIPQE GDISELKTAF TEQQLGAGFT QAEIDSFLSS
AQYNQKVIDA ITTPWEAKPW FQYHPIFLTD KRLEKGLNFW RTHDATIAKA AKTYQVDPEI
IVAIIGIETF YGGYMGTYPV IDALYTLGFH YTPRADFFRK ELAQLQTLAK EEKLDLTTLK
GSYAGAMGYG QFIPSSYRHF AVDFSGDGRR DLVGDPVDAI GSVANYFHQH GWQKGGLVTL
PLTTHHLPAH LKAWSGEKLS YKVADILSPT ISLAQNVDLD VQQPALLVEL EQQDGKDYWL
GLNNFYVITR YNRSPLYAMA VYQFSQQLKD AYAKQ
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