| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2935 |
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| Symbol | |
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| ID | 4922137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3473788 |
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| End bp | 3475671 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164540 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_001095060 |
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| Protein GI | 127513863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0357968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0108979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCCAC GTAAACGGAT GGCCATGCAT GATCATGCCG CCGAAGCCTC GCTGTTCAAA
CGCCGCGCCA TCTTCACCTT TGCCTGCGTG GTGGTCTTGC TAAGCATACT GCTAGGTAAC
CTCTATCATC TGCAAGTCTT GTCCTACAAG GACTACGAGA CCCGCTCCAA CGACAACCGC
ATCCGCGTCG TGCCCGTGGC GCCAAGCCGC GGTTTGATCT ACGACAGACA CGGCCAACTG
CTGGCGGAGA ACCAGCCCTT CTACTCGCTG GAGCTGATCC CAGAGAAGGT TAAAGACGTT
CCCGCGACCC TGGATGAACT CGCTAAGGTC GTCGAGCTCA GCAAGGATGA CAGAGAAAGC
CTGGTCGCCT CCCTCAAATA CCATCGCCGC TTCAAGCCGA TAACGGTCAA GAACCGCCTG
TCGGAGGAGG AAGTGGCGAT CTTTAGCGTT AACCAACACA GATTCCCTGG CTTCTCCATC
GACGCGGGCC TGAAACGCCA CTACCCCTAC GATGGGCTGC TGACCCATGT GCTGGGCTAT
GTGGGCCGCA TCAACAACAG GGACCAGGCC GCATTGCAAC GTAACGGCCA GTGGCAGAAC
TACGCCGCCA CCAAGGATAT CGGCAAGCAG GGAATCGAAA AATTTTATGA GAGCCTGCTG
CACGGCATGC CGGGTCATCT CGAAGAAGAG GTCAATAACC GCGGCCGCAC CATTCGCACC
CTTAAATCTG TGGCGCCAGA GCCGGGCCAG GATATCTACC TGACCCTGGA TCTTCAGCTA
CAGAAGAAGG CGATGGAGCT ACTGGCGGGT CGCCGCGGCT CAATCGTGGC TATCGATCCT
CGCGATGGCG GCATACTGGC CATGGTCTCC AGCCCCAGCT ATGACCCGAA CCAGTTCGTG
CACGGCATCA GCTCCAAGGC CTATAGCGAT CTGCTCAACG CTCGCTCACG CCCTTTGATC
AACCGCGCCA CTCAGGGCCA ATACGCCCCG GCATCGACGG TTAAGCCTCA CATGGCGCTG
CTGGGCCTGG AAGAGAAGGT AGTGACCCCT AAGACCCGGG TGTGGGATCC AGGCTTTTGG
CAGATCCCCG GCGTCGAGCG CAAGTATCGC GACTGGAAAC GTTGGGGCCA CGGCTGGGTC
GATGTCAACG GCGCCCTGGT GCACTCCTGT GACACCTACT TCTACGACAT GGCCTACAAG
ACGGGCATAG ATAAGATCAG CAACTTCATG CAGCAGTTCG GCTTTGGCGA GCGCACAGGT
GTCGATATCT TCGAGGAATC GGCCGGTAAC ATGCCATCCA AGGACTGGAA GCGCCTCAAA
TACAATCAGC CCTGGTATAT CGGCGATACC ATCTCGGTGG GGATCGGCCA GGGTTACTGG
ACCACCACGC CGCTGCAGCT GGCCAACGCC ACCGCCATCA TGGCCAACAA GGGCGAGCGT
TTCGTGCCGC ACCTGTTGAA GTCGATCAAA AATGATACCG TCAAGGTCGA CACGCCGGTA
GATAAGATGG CGCCCGTGGT GCTTAAGAGT CCACACAACT GGCAGATCAT CAACGAGGCG
ATGCGAGATA CCGCCCATAA GTCGCGCTTC GTCGACGCGG GCTATACCGC GGCGATGAAG
ACGGGTACCG CCCAGGTCTT CAGTGTAGCC GAAGATGAAA AGTATGACGC CGAAAATATC
GACGAACACC TGAGGGACAA CGCCTTGATC GTCGCCTACG CCCCCTATGA GGCGCCGCGT
ATCGTGCTGG CAGTGGTACT GGAAAACGCC GGTTGGGGTG GCGCCAACGC AGGCCCCGTG
GCCCGCGCCC TGCTGGATGA GTATATGCTT CGCGATAACC TGCCCTTAGA AACCGCCGGG
AGCCCACACA ATGAACGCCC ATAG
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| Protein sequence | MAPRKRMAMH DHAAEASLFK RRAIFTFACV VVLLSILLGN LYHLQVLSYK DYETRSNDNR
IRVVPVAPSR GLIYDRHGQL LAENQPFYSL ELIPEKVKDV PATLDELAKV VELSKDDRES
LVASLKYHRR FKPITVKNRL SEEEVAIFSV NQHRFPGFSI DAGLKRHYPY DGLLTHVLGY
VGRINNRDQA ALQRNGQWQN YAATKDIGKQ GIEKFYESLL HGMPGHLEEE VNNRGRTIRT
LKSVAPEPGQ DIYLTLDLQL QKKAMELLAG RRGSIVAIDP RDGGILAMVS SPSYDPNQFV
HGISSKAYSD LLNARSRPLI NRATQGQYAP ASTVKPHMAL LGLEEKVVTP KTRVWDPGFW
QIPGVERKYR DWKRWGHGWV DVNGALVHSC DTYFYDMAYK TGIDKISNFM QQFGFGERTG
VDIFEESAGN MPSKDWKRLK YNQPWYIGDT ISVGIGQGYW TTTPLQLANA TAIMANKGER
FVPHLLKSIK NDTVKVDTPV DKMAPVVLKS PHNWQIINEA MRDTAHKSRF VDAGYTAAMK
TGTAQVFSVA EDEKYDAENI DEHLRDNALI VAYAPYEAPR IVLAVVLENA GWGGANAGPV
ARALLDEYML RDNLPLETAG SPHNERP
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