Gene Shew_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2903 
Symbol 
ID4921364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3442499 
End bp3443431 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content61% 
IMG OID640164500 
Producthypothetical protein 
Protein accessionYP_001095028 
Protein GI127513831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.91197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.892682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATAG TCTTTACCTT TCTCGCCGCC TTCATGCAGT CCTGGCGTAA TGCCCTGCAG 
AGTCAGCTGA GCCGCGATGT CAAGGTGGCC GGGGTAACGC TGGCGCGTTT TCTCTGGGCC
GGACCCATCG CCGCCTGTTA TCTTGCCGCG CTTTACCTCT TCCTGCCGCC CGACCTGCAA
CAAGCGGGGC AACAAGTGGG TCAACAAGCA GGGCAACAAG TGGGGCAAGA GAGCCTGCAG
CTGTTTCCCG CCCCTTTCTG GGGTTTCGTG CTCGGCGCTG CCTTGATGCA GATTGTGGCC
ACGGGTTTGA TGGTGAAACT GTTTCAGCTC AGAGACTTCG CCATAGGCGC TGGCCTTGCC
AAGAGCGAGG CGATCGTCGC TGCCGTGTTT GGTGCCCTGT TTTTCGGCAC CCAACTGAGC
CCGCTGGGCT GGCTCGGCGT GGTGATTGGC GCGGTGGCCG TGCTCCTGAT GAGCAAGGGC
GCTGGGGTTG CCAGGCTCTC GCCTCAGGTG TTGCTGCTGG GACTCGCCTG CGGCAGCGCC
TTCGCGCTCA CCTCGCTCTG GGTCAGAGAG GCAAGTCTGG TGCTGACTCT GCCTTTTCCC
CACAGCGCCG CCTGGGTGCT GTTCTGGGTG ATAAGCGTGC AAACTGTCAT CTTGCTGCTG
TTTCTCTACT TGCGGGACCG TCAGACCCTG GCGGCCCTGT GGCGTCGGCC TAAGTTGACC
CTGGCTATCA GCGTGACCAG CTGCCTGGGC TCCATCGGTT GGTTCAGCGC CATGGCCTTG
CAGGCGGTGC CCTATGTGAA GACCTTAGGT CAGGTAGAGG TGTTTTTTAC CCTAATCGTG
GCGGGGAGTT ATCTGAAGCA GAAGGTGAAG CCGAAGGAGA TGACCGCCTT GCTGCTTATC
GCAGTGGCGG CCATCTTGGT GATTTGGGGA TGA
 
Protein sequence
MWIVFTFLAA FMQSWRNALQ SQLSRDVKVA GVTLARFLWA GPIAACYLAA LYLFLPPDLQ 
QAGQQVGQQA GQQVGQESLQ LFPAPFWGFV LGAALMQIVA TGLMVKLFQL RDFAIGAGLA
KSEAIVAAVF GALFFGTQLS PLGWLGVVIG AVAVLLMSKG AGVARLSPQV LLLGLACGSA
FALTSLWVRE ASLVLTLPFP HSAAWVLFWV ISVQTVILLL FLYLRDRQTL AALWRRPKLT
LAISVTSCLG SIGWFSAMAL QAVPYVKTLG QVEVFFTLIV AGSYLKQKVK PKEMTALLLI
AVAAILVIWG