| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2868 |
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| Symbol | |
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| ID | 4922247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3404415 |
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| End bp | 3406223 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164465 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001094993 |
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| Protein GI | 127513796 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAC AACTACTCAA TGCCCGCGAC ATGGATTTTC TGCTGTATGA ATTCCTGGAC
ACAGAAGGAC TACTGCAGCG CCCCCGTTAT TGCGAGCACA GCCGCGAGGT GTTTGACGCC
ACCCTGGAGA CGGCGAAAAC CATCGCCGAG AAATACTTTG CCAATCACAA CCACAAGGGG
GACGAGCAGG AGCCGACCTT CGACGGTGAA AGGGTGCAGA TGATCCCGGA AACCAAGGAG
GCCTGGGACC ATTTTGCCGA TGCTGGCTTT CTGGCTGCCC ACTATGACTT CGAAGATGGC
GGCATGCAGT TGCCAGAGAT CATACTGCGC GCCGCGATGG CCTATTTCAG CGCCGCCAAT
ACCGCCACCG CCGGCTATCC TTGCCTGAGT CTGGGAGCGG CTAACCTGAT TCAGAGCTTT
GGCAGCGACG AGCAGAAGGC TAAATTTATT CCCCCCATGC AGGAGGGCCG CTTCGCTGGC
ACCATGGCGA TGACAGAGCC GGGCCAGGGC TCGGCGCTGG CCGACATCAC CACCAAGGCG
GTGCCACAGG CCGACGGCAG CTATCTGATC ACGGGCCAGA AGATGTTTAT CTCAGGCGGT
GATCAGAGCA TCACAGAGAA CATTATCCAC ATGACCCTGG CGAAGATCGA GGGCGCCCCG
GCCGGCGTCA AGGGGATCTC CCTGTTTATC GTGCCCAAGT TCCTGGTCAA TGACGATGGC
TCCCAGGGGG AGCGTAACGA CGTGGCCCTG GCCGGTCTGC TGCACAAGAT GGGCTTTCGT
AACACCACCT CTACCGTCTT GTCATTTGGC GAGAAGGGCG GCGCCGTGGG TTACCTGGTC
GGCGAGCCCC ACAAGGGCCT GGCCTACATG TTCCAGATGA TGAATGAGGC GCGCATCTTC
GTCGGCAGCA CGGCGGCGGT GCTGGGCTAC CAGGGCTTTA ATGCCTCCCT GGAATACGCC
CGTGAGCGTC CTCAGGGACG TCTGCCATCG AACAAAGACC CTGAGTCCAA GCAGATCCCT
ATCGTGCAAC ACGCCGATGT GCGCCGCATG TTGCTGGCGC AGAAGGCCTA TGTGGAAGGC
TCGCTGGCGC TGTGTCTGTA TGCCAGCTCG CTGTTTGAAG ATAGCCACAC GGCGGATACG
CCAGAGGCCC GTCAGCAGGC CTTCATGCTG CTTGATCTGC TGACGCCCAT AGTCAAATCC
TGGCCCTCAA AGTACGCCCT CAAGGCCAAC GATTTGGCCA TACAGGTACT CGGTGGCTCG
GGTTATATCC GCGAGTATCC GGTGGAGCAG TATTATCGCG ACAACCGCCT CAATCCAATC
CATGAGGGCA CGGAGGCGAT CCACGGCCTG GATATCCTGG GGCGCAAGGT GCCTATGGGG
AACATGGCCG CCTATGAGCT GTTTGTGAAG GCGGTGGAAG CCACTGCCGC CGAGGCCGCT
GCGAGGGAAA CGACTTCCGA GATGGGCCAA TCCCTGCTCG CCGCGCTTGG CAAGCTGAGC
AGGCTCAATG CCGTACTGCT GCCCATGCTG GCCAAAGATC CGGATTTGGG CCTGGCCAAC
GCCACCCTGT ATCTGGACGT GTTTGGCCGC ATCACCGCCA GCTGGATCTG GCTACAGCAG
GCCAATATCG CCGCGGCCAA GCTGGCCGAA GAGGGGGCTC TGTCTGTCGA TGATGCCAAC
TTCTATCAGG GTAAGCTGCA GGCGGCGCGT TACTACCTGG AGTGGGAACT GCCGGAGATC
GATCCGCAGA TCGCCCTGCT GGAGAGCCAT AACAGTGTGC CCTTCGATAT GCAGGACGCC
TGGTTCTAG
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| Protein sequence | MTVQLLNARD MDFLLYEFLD TEGLLQRPRY CEHSREVFDA TLETAKTIAE KYFANHNHKG
DEQEPTFDGE RVQMIPETKE AWDHFADAGF LAAHYDFEDG GMQLPEIILR AAMAYFSAAN
TATAGYPCLS LGAANLIQSF GSDEQKAKFI PPMQEGRFAG TMAMTEPGQG SALADITTKA
VPQADGSYLI TGQKMFISGG DQSITENIIH MTLAKIEGAP AGVKGISLFI VPKFLVNDDG
SQGERNDVAL AGLLHKMGFR NTTSTVLSFG EKGGAVGYLV GEPHKGLAYM FQMMNEARIF
VGSTAAVLGY QGFNASLEYA RERPQGRLPS NKDPESKQIP IVQHADVRRM LLAQKAYVEG
SLALCLYASS LFEDSHTADT PEARQQAFML LDLLTPIVKS WPSKYALKAN DLAIQVLGGS
GYIREYPVEQ YYRDNRLNPI HEGTEAIHGL DILGRKVPMG NMAAYELFVK AVEATAAEAA
ARETTSEMGQ SLLAALGKLS RLNAVLLPML AKDPDLGLAN ATLYLDVFGR ITASWIWLQQ
ANIAAAKLAE EGALSVDDAN FYQGKLQAAR YYLEWELPEI DPQIALLESH NSVPFDMQDA
WF
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