Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2859 |
Symbol | |
ID | 4922238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3390755 |
End bp | 3391429 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164456 |
Product | phosphoglycerate mutase |
Protein accession | YP_001094984 |
Protein GI | 127513787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCGC TCTATCTTAT CCGGCACGGT CAGGCCTCCT TTGGCAGCGC CAACTATGAT CAACTCTCAA ACCTGGGCAC CCAGCAGTGC CTCTGGTTGG GTGAGTACCT CAAAGAGCGC AGTATCCGCT TCGAGCGCAT CATCTGCGGC GATATGGCGC GCCATCGCCA GTCGGCCGAG GCGATCTGCC AAGGGCTTGG GCACCGCCTC GAATTTGAAT GCCACCCTGG CTTCAATGAG TTTGACTTTA TGACCCTACT GAAAGGCTTC GGCGAGGCAA ACCCGCAGCA CGCCATCAAA GATTGGCGCA ATCACCGCGA GGTGTATTCC TGCCTCAGGC TCGCCATGTT GGCCTGGTCG GAGAACGCCC TGCCCGCCGA GGTGCCGCTA GAAAGCTGGC AGGCCTTTCA GCAGCGGGTG GCCGACGGAC TGGATTTTGC CCGCCGCCAG CCCAAGGGCA ACACTCTGGT TGCCACCTCA GGCGGCGCCA TCAGCATCGC CCTGAGCCAA ATCATGGGCT TTGGCGCCCA GACGGTGGTG AACCTGAATT TGCAGAGCAA GAACTCGGGG ATCACCCACT GTTATTTCTC TGACAGCGCC ACCTATGTTA CCGGCATCAA TGCCACCCCC CATCTGGATC GTCCAGATCG ATGGGATTCG GTCAGTTACA GCTAA
|
Protein sequence | MAALYLIRHG QASFGSANYD QLSNLGTQQC LWLGEYLKER SIRFERIICG DMARHRQSAE AICQGLGHRL EFECHPGFNE FDFMTLLKGF GEANPQHAIK DWRNHREVYS CLRLAMLAWS ENALPAEVPL ESWQAFQQRV ADGLDFARRQ PKGNTLVATS GGAISIALSQ IMGFGAQTVV NLNLQSKNSG ITHCYFSDSA TYVTGINATP HLDRPDRWDS VSYS
|
| |