Gene Shew_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2859 
Symbol 
ID4922238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3390755 
End bp3391429 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content59% 
IMG OID640164456 
Productphosphoglycerate mutase 
Protein accessionYP_001094984 
Protein GI127513787 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC TCTATCTTAT CCGGCACGGT CAGGCCTCCT TTGGCAGCGC CAACTATGAT 
CAACTCTCAA ACCTGGGCAC CCAGCAGTGC CTCTGGTTGG GTGAGTACCT CAAAGAGCGC
AGTATCCGCT TCGAGCGCAT CATCTGCGGC GATATGGCGC GCCATCGCCA GTCGGCCGAG
GCGATCTGCC AAGGGCTTGG GCACCGCCTC GAATTTGAAT GCCACCCTGG CTTCAATGAG
TTTGACTTTA TGACCCTACT GAAAGGCTTC GGCGAGGCAA ACCCGCAGCA CGCCATCAAA
GATTGGCGCA ATCACCGCGA GGTGTATTCC TGCCTCAGGC TCGCCATGTT GGCCTGGTCG
GAGAACGCCC TGCCCGCCGA GGTGCCGCTA GAAAGCTGGC AGGCCTTTCA GCAGCGGGTG
GCCGACGGAC TGGATTTTGC CCGCCGCCAG CCCAAGGGCA ACACTCTGGT TGCCACCTCA
GGCGGCGCCA TCAGCATCGC CCTGAGCCAA ATCATGGGCT TTGGCGCCCA GACGGTGGTG
AACCTGAATT TGCAGAGCAA GAACTCGGGG ATCACCCACT GTTATTTCTC TGACAGCGCC
ACCTATGTTA CCGGCATCAA TGCCACCCCC CATCTGGATC GTCCAGATCG ATGGGATTCG
GTCAGTTACA GCTAA
 
Protein sequence
MAALYLIRHG QASFGSANYD QLSNLGTQQC LWLGEYLKER SIRFERIICG DMARHRQSAE 
AICQGLGHRL EFECHPGFNE FDFMTLLKGF GEANPQHAIK DWRNHREVYS CLRLAMLAWS
ENALPAEVPL ESWQAFQQRV ADGLDFARRQ PKGNTLVATS GGAISIALSQ IMGFGAQTVV
NLNLQSKNSG ITHCYFSDSA TYVTGINATP HLDRPDRWDS VSYS