| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2832 |
|---|
| Symbol | glmM |
|---|
| ID | 4922339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3356635 |
|---|
| End bp | 3357966 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640164429 |
|---|
| Product | phosphoglucosamine mutase |
|---|
| Protein accession | YP_001094957 |
|---|
| Protein GI | 127513760 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | [TIGR01455] phosphoglucosamine mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0011182 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00495377 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAAAT TCTTCGGAAC CGATGGTATC AGAGGCAAGG TGGGCGCGGG TAAGATGACC
CCGGAATTGG CGCTCAAACT TGGCTGGGCG GCGGGGCGCG TGTTATCCCG CACCGGCACT
AAGAAGGTGA TCATAGGTAA GGATACGCGT ATTTCAGGCT ATCTGTTCGA ATCTGCGATG
GAAGCCGGCC TGTCGGCCGC TGGTTTGAAT GTGATGTTGA TGGGACCTAT GCCGACACCG
GCTGTGGCCT ATCTGACCCG TACCTTCAGG GCGGAAGCCG GTGTGGTGAT CAGTGCATCT
CACAATCCTT ACTATGATAA CGGCATCAAG TTCTTCTCTA CCGACGGTAG CAAACTGGAT
GACGAGGTAG AGCTGGAGAT CGAGCGTGAG CTTGAAAAGC CGCTGGAGTG TGTCGAGTCC
CACCTGCTGG GTAAGGTGTC TCGCATCGAA GACGCCGCCG GTCGTTATAT CGAATACTGT
AAGGGGAATT TCCCTGCCGA GCATACCCTC AACGGTCTAA AGATAGTGGT CGATTGTGCC
CACGGGGCAA CCTACCATAT CGCGCCGAGT GTGTTTCGCG AGCTTGGCGC CGAGGTGATC
ACCATAGGTG ACAAGCCAGA TGGCATCAAC ATCAACCATG AGGTGGGCGC TACCTCTATG
GGTAAGATCC GCGAGACAGT GATCGCCGAA AAGGCGGATC TGGGTATCGC ACTGGATGGC
GATGGTGACC GCATCATGAT GGTGAATCGT CATGGTAAGG TGATCGACGG CGATGAGATC
CTATATATCC TGGCCTGTGA TGCTCAGGAT CGCGGCGTGC TCAAAGGCGG CGTGGTCGGT
ACCCTGATGT CTAACCTGGG GCTGGATTTG GCACTCAAGG CCCGTGATAT TCCCTTTGCC
CGCTCTAAGG TGGGTGACCG CTATGTGATG GAGCTGCTCA AAGAGAAAGA TTGGCGCATC
GGCGGTGAGA ACTCAGGCCA TATCCTGAAT CTGGATCATG GCACCACGGG GGATGGTATC
GTCGCCGGTA TTCTGGTGCT GGCGGCCATG TGTCGTAAGC AGGCGACCCT TGAGGAGCTG
ACCGAAGGCA TTAAGATGCT GCCACAGGTG CTGGTGAATG TCAGATTCGA AGGTACTCAC
AACCCGTTAG AGGCCGATAG CGTATTGAGC GCCCAGGCGG AAGTGGAAGC CAAACTCGGC
GAACGTGGCC GCGTACTGCT GCGTAAGTCG GGCACAGAGC CACTTATTCG TGTCATGGTC
GAAGGCGATG TCGCCAGCGA TGTAAAAGCC CACGCAAACT ATATTGCCGA GGCCATCAAG
GCGCTAGTTT AA
|
|---|
| Protein sequence | MRKFFGTDGI RGKVGAGKMT PELALKLGWA AGRVLSRTGT KKVIIGKDTR ISGYLFESAM
EAGLSAAGLN VMLMGPMPTP AVAYLTRTFR AEAGVVISAS HNPYYDNGIK FFSTDGSKLD
DEVELEIERE LEKPLECVES HLLGKVSRIE DAAGRYIEYC KGNFPAEHTL NGLKIVVDCA
HGATYHIAPS VFRELGAEVI TIGDKPDGIN INHEVGATSM GKIRETVIAE KADLGIALDG
DGDRIMMVNR HGKVIDGDEI LYILACDAQD RGVLKGGVVG TLMSNLGLDL ALKARDIPFA
RSKVGDRYVM ELLKEKDWRI GGENSGHILN LDHGTTGDGI VAGILVLAAM CRKQATLEEL
TEGIKMLPQV LVNVRFEGTH NPLEADSVLS AQAEVEAKLG ERGRVLLRKS GTEPLIRVMV
EGDVASDVKA HANYIAEAIK ALV
|
|---|
| |