Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2829 |
Symbol | |
ID | 4922336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3354335 |
End bp | 3354820 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640164424 |
Product | hypothetical protein |
Protein accession | YP_001094954 |
Protein GI | 127513757 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000100799 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00340048 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCTTTT TTGTTTTTCG GGGGGTAACC TTGGCAACTT TAGAAAGTAA GCTGGAACAG ATGCTTATCG CACCAGTTGA AGCATTGGGC CATAGTCTGT GGGGATTGGA ATATGTACAG GCAGGCAAGC ATTCAGTGCT GCGTGTATAT ATAGATAATG AAAACGGCAT CTTTATCGAT GATTGTGCCG ATGTCAGTCG CCAGATCAGT GCCGTGCTCG ATGTCGAGGA CCCGATTTCG ACCGAATATA CACTAGAAGT TTCCTCACCG GGTGTCGATA GACCATTATT TACTGCAGAG CAGTATGCGC GATACCTAGG TGAAACCGTA AAGGTACAAC TGACTATGCC TGTCGCTGGT AGTCGTAATT TAAAAGGGAC CGTCGCGGGC GTTGAGGGGC AGATGCTGAC CCTTACCGTA GATGGCAACG AACTGATTAT TGCCTTGGAT AACATCCGCA AGGGCAACTT AATCGCTAAG TTTTGA
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Protein sequence | MPFFVFRGVT LATLESKLEQ MLIAPVEALG HSLWGLEYVQ AGKHSVLRVY IDNENGIFID DCADVSRQIS AVLDVEDPIS TEYTLEVSSP GVDRPLFTAE QYARYLGETV KVQLTMPVAG SRNLKGTVAG VEGQMLTLTV DGNELIIALD NIRKGNLIAK F
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