Gene Shew_2806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2806 
Symbol 
ID4922540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3324475 
End bp3324975 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID640164401 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001094931 
Protein GI127513734 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00151094 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATATAC GTAGCGAAGC CCCCGGCGAT ATCGCCGCTA TAGAAGAGAT CACCAAGGCC 
GCCTTTCTCG AGGCGCCCCA CACAGACCAT ACCGAGCATC TTATCGTTAA CGCCCTGAGA
GATGCAGGCG CGCTGGCGAT ATCGTTAGTG GCCGAGGTGC AGGGAAAGAT AGTGGGGCAT
GTCGCCCTGT CCAGGGTGAC CATCTCCGAT GGGAGCCAAG ACTGGTATGG ACTCGGCCCT
ATCTCGGTAG TGCCCGAGCG TCAGGGAGAG GGGATCGGCA GCGCCTTGAT GGGCGCCGCG
CTGGAGGCGC TCGATAACGC AAGTGCCCAT GGCTGCGTGT TGCTGGGAGA GCCTGAGTTT
TATCAGCGTT TTGGCTTTGC CCCCAAGGCA GGACTTATTC TACCCGGCGT GCCCGAGGCT
TATTTTCTCG CGTGTAAACT GGGCGGCGAA TGGCCTCAGG GCGAGGTGAG TTACCATGAT
GCCTTTCAGG TAAGGAATTA A
 
Protein sequence
MHIRSEAPGD IAAIEEITKA AFLEAPHTDH TEHLIVNALR DAGALAISLV AEVQGKIVGH 
VALSRVTISD GSQDWYGLGP ISVVPERQGE GIGSALMGAA LEALDNASAH GCVLLGEPEF
YQRFGFAPKA GLILPGVPEA YFLACKLGGE WPQGEVSYHD AFQVRN