Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2806 |
Symbol | |
ID | 4922540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3324475 |
End bp | 3324975 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640164401 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001094931 |
Protein GI | 127513734 |
COG category | [R] General function prediction only |
COG ID | [COG3153] Predicted acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00151094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATATAC GTAGCGAAGC CCCCGGCGAT ATCGCCGCTA TAGAAGAGAT CACCAAGGCC GCCTTTCTCG AGGCGCCCCA CACAGACCAT ACCGAGCATC TTATCGTTAA CGCCCTGAGA GATGCAGGCG CGCTGGCGAT ATCGTTAGTG GCCGAGGTGC AGGGAAAGAT AGTGGGGCAT GTCGCCCTGT CCAGGGTGAC CATCTCCGAT GGGAGCCAAG ACTGGTATGG ACTCGGCCCT ATCTCGGTAG TGCCCGAGCG TCAGGGAGAG GGGATCGGCA GCGCCTTGAT GGGCGCCGCG CTGGAGGCGC TCGATAACGC AAGTGCCCAT GGCTGCGTGT TGCTGGGAGA GCCTGAGTTT TATCAGCGTT TTGGCTTTGC CCCCAAGGCA GGACTTATTC TACCCGGCGT GCCCGAGGCT TATTTTCTCG CGTGTAAACT GGGCGGCGAA TGGCCTCAGG GCGAGGTGAG TTACCATGAT GCCTTTCAGG TAAGGAATTA A
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Protein sequence | MHIRSEAPGD IAAIEEITKA AFLEAPHTDH TEHLIVNALR DAGALAISLV AEVQGKIVGH VALSRVTISD GSQDWYGLGP ISVVPERQGE GIGSALMGAA LEALDNASAH GCVLLGEPEF YQRFGFAPKA GLILPGVPEA YFLACKLGGE WPQGEVSYHD AFQVRN
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