| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2764 |
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| Symbol | |
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| ID | 4922759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3269102 |
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| End bp | 3270013 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164359 |
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| Product | DNA-binding transcriptional activator GcvA |
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| Protein accession | YP_001094889 |
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| Protein GI | 127513692 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.872031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.426445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGAC GCTTACCTCC ATTGAATGCG GTGAAGGCTT TCGAGGCTGC AGCCCGTCAC
TTAAGCTTTA CGCGCGCCGC GGAAGAACTT TTTGTGACAC AGGCCGCAGT AAGTCATCAG
ATTAAGGCAT TAGAAGAATA TTTAGGGCTA AAGCTCTTTC GTCGTAAGAA CCGATCTTTG
CTGCTGACCG AAGAGGGGCA GGGCTACTTT CTCGACATAA AAGATATCTT TGTACAACTG
GCCGATGCCA CCGACAGATT GCTGGCTCGA AGCGCCATAG GCTCGCTCAC GGTAAGCACT
TCGCCCAGTT TCGCCATTCA GTGGCTGGTG CCGCGATTGG CTAATTTCAG CGAGAATAAT
CCCGACATCG ACGTGCGGAT CAAGGCGGTG GACGATGAGA CCAGCAGCCT GACCGACGAC
GTGGATGTAG CCATCTATTA CGGCATGGGC AACTGGCCAG GGCTGCGTGC CGACAAGCTG
AGAAACGAGG TGTTGATCCC TGTCTGTTCG CCCATGTTGC TCAGCGGCCC CAAGCCGTTA
TCCCAGCCGA GCGACCTGAA ACATCACACC CTGCTGCATG ACTCCAGCCG TCATGATTGG
CAGGCTTGGT TTAGACAATG TGGAATTAAT GACATTAATG TGAACCAGGG CCCCATCTTC
AGTCACTCCT CCCTGGTATT GCAGGCCGCC GCTCACGGTC AGGGGGTCGC CTTGGGTTAC
AGCGTGTTGG CCCGTCCCGA CATCAAGGCC GGGCGTCTGG TGTGCCCCTT CCCCGAGGTG
TTGGTGAGTA AGAACGCCTA TTATCTGGTG TGTCAGCAGA ATCATGCCGA GATAGGCAAG
ATTGTTGCTT TCAGAAAGTG GATGCTCGAC ATGTTCGAAG AGGAGTCTCG CAGCGAGCTG
CTGCCGGGCT AA
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| Protein sequence | MSRRLPPLNA VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEEYLGL KLFRRKNRSL
LLTEEGQGYF LDIKDIFVQL ADATDRLLAR SAIGSLTVST SPSFAIQWLV PRLANFSENN
PDIDVRIKAV DDETSSLTDD VDVAIYYGMG NWPGLRADKL RNEVLIPVCS PMLLSGPKPL
SQPSDLKHHT LLHDSSRHDW QAWFRQCGIN DINVNQGPIF SHSSLVLQAA AHGQGVALGY
SVLARPDIKA GRLVCPFPEV LVSKNAYYLV CQQNHAEIGK IVAFRKWMLD MFEEESRSEL
LPG
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