Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2748 |
Symbol | |
ID | 4922915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3248436 |
End bp | 3249728 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164343 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001094873 |
Protein GI | 127513676 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000859237 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000414607 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTGATT CATATTCAGG GTATCAACTA CTCACTCGAT TAGTGATATA TCTACTGCTC TGTCTTGCCG TTGGATTACT CATAAATCAG GTGCTGTGGA TCATGTTGCT GGGCAGTATC GCCCTGCTCA TTTGGCACTA TAAACAGATC TCAAGACTCA ACTATTGGCT GTGGCGCGAT AAGCGACTGA CGCCACCCAA CGGCAGTGGC AGTTGGGAAG GGGTGTTCAA CGGTATCTAC CGTTTGCAGG GGAAAAACCG TAAACGTGTC AGCCAGCTCG CCTATCTTCT CGCCCGCTTC AGACAAGGGG CCGAGGCGCT ACCCGATGCG GCCGTGGTGC TCGATTCAGA GAACAACATC GCCTGGTGTA ACAAGCTTGC CCAGCTCATG TTAGGCCTGG TGTGGCCCCA GGATAACGGT CAGCGGATCG ACAACCTTAT CCGTCACCCC GACTTCTCCA AATACCTCAA GCAGGCCGAT TTCGACGAGC CGTTCGAACT TATCGACACC CAGAGTGATA GCCGTATCTT AGAGATTCGT ATCATGGGCT ATGGTTCGGG GCAGCGGTTA TTGATTGCCC GCGACATCAC ACGTATTCGC CAGCTTGAGG GGATGCGTAA GGAGTTTGTG GCCAACGTTT CTCACGAGCT CAAGACGCCG CTGACAGTAT TGCAGGGTTA CCTGGAGATG ATGCAGGGGA TGGCCGAGCC AGACTCGCCC AATGCCAAGG CGATGTCGCA GATGCAGCAG CAGACCAACC GTATGCGTTC CATGGTCGAG CAGCTGCTGG TGCTGTCGCG CATCGAAGAT GGTAGCGCGG TAAACCTTGA GACCAAGGTG AACATGACAG TGCTCATGGA GACTCTCAAA GAGGAGGCGC AGGCGCTGGC CTTGGGGCAG TATGAACTGT CTATCGAGGC GGATCCCGGC CTGAATCTTT ATGGCAGCGA GGTGCAGCTT CGTAGTGCCT GCTCTAACCT GGTGTCGAAC GCCATTCGTT ATACCGAGCC CGGCGGTAAG ATCAGCATTC GCTGGAAACG TGTGCCTATG GGGGCCGAGT TTAGCGTGAC CGATACCGGC GAGGGTATAG CGCCGCAGCA TCTTACCCGT CTAACCGAGC GCTTCTACAG GGTCGATAGC GCCCGCTCGC GCCAGAGTGG CGGCTCGGGA TTGGGCCTGG CCATCACCAA ACACGCTTTG CATCATCACC AGAGCGATCT CACCATTGAG AGTAAGCTAG GGGTAGGTAG CCGCTTTAGC TTCATCATCC CTAATCATCT GCTCGACCTT TAG
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Protein sequence | MFDSYSGYQL LTRLVIYLLL CLAVGLLINQ VLWIMLLGSI ALLIWHYKQI SRLNYWLWRD KRLTPPNGSG SWEGVFNGIY RLQGKNRKRV SQLAYLLARF RQGAEALPDA AVVLDSENNI AWCNKLAQLM LGLVWPQDNG QRIDNLIRHP DFSKYLKQAD FDEPFELIDT QSDSRILEIR IMGYGSGQRL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQGMAEPDSP NAKAMSQMQQ QTNRMRSMVE QLLVLSRIED GSAVNLETKV NMTVLMETLK EEAQALALGQ YELSIEADPG LNLYGSEVQL RSACSNLVSN AIRYTEPGGK ISIRWKRVPM GAEFSVTDTG EGIAPQHLTR LTERFYRVDS ARSRQSGGSG LGLAITKHAL HHHQSDLTIE SKLGVGSRFS FIIPNHLLDL
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