Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2744 |
Symbol | |
ID | 4922911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3242973 |
End bp | 3243902 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164339 |
Product | putative esterase |
Protein accession | YP_001094869 |
Protein GI | 127513672 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000586392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTAC ACCAACTGGC CCCATCGTTG GCCATCTTGC CGTTAATTGT CTCATTGACC ACTATGGCCG CCGCTGTTGA GCCAGTCGTC GATGCGGCGC CGGCTTCTAA GGCGGTTGCT AAAGCGGCCG TGCCTAAGGT GGAGATCCCC CGTACAGCTG TATTCGAGCT GACCGATCCC CTGAGCAAGC GCATCTATCC ACTCTGGGTA AAGCTGCCGC GCTCTTATCA AGCCGATAGC ACGAGACATT ACCCCGTGGT CTATGTCTCC GATGCGCCCT ATGCCTTTCA GATTGTCTCG GGCATGACCC GCTTTCCCAT GAATAGCGGC AAGATGCGTG AGGCCATCAT AGTCGGGCTT TCCTATGCAA AGGGGGACAA GGGGGCCCAG AGCCGGGTGC GTGACTATAC CCCCTTTAAC GATTCGAGCT GGAAGTTAAC AACCGGCGGT GCCAGTCACT ACGCCGATTA TCTAGAGACT CAGGTGTTAC CCTTCATGGC CGAGCATTAT CGGGTAGATG ACAAGGAGCG CACTTTCGTC GGCAACTCCC TCGGCGGCCT GCTTGGGGCC TATCTGCTAC TGGAGAAGCC GAATCTGTTT GATAACTATG TGTTGGGCAG CCCCTCGGTG TGGTTTAACG GCGAGCAGCT GTTATCTCTA ACGGCGAAGC CGAGAGCCGA TGATAAACAG GCGCGGCGAG TGTTCCTGGC GGTCGGCGCG CTGGAGACAC CTGCTAAGGC GGGGATGCAA CACGACATGG TCGCTGGAGC GGATAAACTT GGTCGCCACC TAAGGCGCCA GCTGGGGGAT AACTTGGTAC TCGAGAGCCT CACCATAGCG GGGGCGCGCC ACGAAACCGC CTTTCCCACC ACGGCGAGCC AAGGCCTCTA TTGGCTCCTG GCGCGCGATG GGGAAGGCAG TATTCAGTAG
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Protein sequence | MKLHQLAPSL AILPLIVSLT TMAAAVEPVV DAAPASKAVA KAAVPKVEIP RTAVFELTDP LSKRIYPLWV KLPRSYQADS TRHYPVVYVS DAPYAFQIVS GMTRFPMNSG KMREAIIVGL SYAKGDKGAQ SRVRDYTPFN DSSWKLTTGG ASHYADYLET QVLPFMAEHY RVDDKERTFV GNSLGGLLGA YLLLEKPNLF DNYVLGSPSV WFNGEQLLSL TAKPRADDKQ ARRVFLAVGA LETPAKAGMQ HDMVAGADKL GRHLRRQLGD NLVLESLTIA GARHETAFPT TASQGLYWLL ARDGEGSIQ
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