| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2695 |
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| Symbol | |
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| ID | 4923204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3190051 |
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| End bp | 3190731 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164290 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001094820 |
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| Protein GI | 127513623 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000581772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.101861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTAC TACTGGTTGA AGACGATTTA GCCCTTCAGG AAAATTTGAG ACAACACCTG
CTCGATGCCA ACTACACCCT AGACATTGCC AGCGACGGCG AAGAGGGCCT GTTTCAGGGA
CGAGAGTATC CCTACGACGC CGCCATTATC GACGTTGGCC TGCCTAAGTT AGATGGTATC
GCGCTGATCG CCAGGTTAAG AGAAGAGGGA ATAGACTACC CCATACTGAT CCTGACCGCG
CGCGACAACT GGCAAGACAA GGTCGAAGGC CTGGATGCCG GCGCAGACGA CTACCTGACC
AAGCCGTTTC ATCCCGAAGA GCTGGTCGCC AGGCTCAAGG CGCTGATCCG CCGGGCGGCG
GGCAAATCCA GCCCTGTGAT TCAAAACGGA CCCTACTCTC TCAACACCAG CAGCCACGAG
ATCAAATTTG GCGACCAGGA TGTCAGCCTG AGCGGCTCCG AATACAAGCT GTTCGAGTAT
TTCATGCTGC ATATCGGCGA GGTGAAGTCC AAGAGCATAT TGATCGAACA CATCTATGAT
CAGGATTTCG ACTTAGATTC CAACGTCATA GAGGTCTTTA TCCGCCGCCT GCGTAAGAAG
CTCGACCCCA ACGGCCAGTA TGGGCTTATC GAGACATTGC GTGGCCAAGG TTACCGCCTC
AAGCCACTGG ATAACAGTTA A
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| Protein sequence | MRLLLVEDDL ALQENLRQHL LDANYTLDIA SDGEEGLFQG REYPYDAAII DVGLPKLDGI
ALIARLREEG IDYPILILTA RDNWQDKVEG LDAGADDYLT KPFHPEELVA RLKALIRRAA
GKSSPVIQNG PYSLNTSSHE IKFGDQDVSL SGSEYKLFEY FMLHIGEVKS KSILIEHIYD
QDFDLDSNVI EVFIRRLRKK LDPNGQYGLI ETLRGQGYRL KPLDNS
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