| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2681 |
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| Symbol | |
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| ID | 4923134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3173838 |
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| End bp | 3175154 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164276 |
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| Product | general substrate transporter |
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| Protein accession | YP_001094806 |
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| Protein GI | 127513609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.31051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA AGAAGAGTTT CGATGATTTG GAGTTTACTC CGCTTCATAA AAAAATAATG
TTATGGGGAA GTGGGGGTCC TTTCCTCGAT GGTTATGTGT TAGTGATCAT AGGGTTAGCC
CTACAACAAC TCACACCTGC CCTAGAGCTA GATGCCCAAT GGATAGGACT AGTCGGAGCC
GCAACTCTGG TCGGCCTGTT TATCGGTACG GCGCTATTTG GTTATGTCGC CGATCTTTTT
GGGCGCAAAC TGATGTTCAT GATAGATATC ATTGCCATCG CCGTCCTCTC CTTCGCCACC
ATGTTCATCT CCTCCCCCAT AGAACTGGTG ATATTGCGTT TCTTGATTGG CATAGTCATA
GGCGCCGACT ACCCTATCGC CACCTCTATG GTCGCCGAAT TTTCCCCAAC GAAACAACGC
GCCTTTACCA TGGGCTTCAT CGCAGCCATG TGGTACGTGG GCGCGACCGC CGCCAATATG
GTGGGCTATC TGCTATACGA TGTCACCGAT GGATGGCGCT GGATGTTTGG CAGCGCTATC
ATCCCCTGCC TGGTTATCTT GCTCGGACGC TTCCATCTGC CGGAATCTCC CAGGTGGCTG
CTGAAGAAAG GCCGTATCGA AGAGTGCAAA CAGGTGATGC ACCAATTTTT CGGCAAAGAT
ATCAGCCTGA ATTTTGAGAC TGCAGAGCAG ACTAAATACA GCAAGTTATT CGAGGCCGTT
TATTTAAAAC GTATCCTGTT TGTCGGCATT ATCTGGACCT GCCAGGTGAT CCCTATGTTC
GCCATATATA CCTTTGGCCC GGAGATCATC GAACTCTTGG GCTTCACCGA CGGTAAAGAT
GCCGCCCTGG GTAATATTGT CATCAGCATC TTCTTCATGG CGGGCTGTAT TCCGGCCATG
TACTGGCTTA ACTCCATAGG TCGTCGCCCC CTGCTCATCG GCAGCTTCGC CATCATGACA
GCCGCCCTGG CGGTGCTGGG AATAGTGGAT ACCCCGAGTA TCTGTCTGAT TGTTGCCGCA
TTTGCCATCT ACGCCTTCTT CTCCGGAGGC CCGGGGATCT TGCAATGGCT ATATCCTAAC
GAACTGTTTC CGACAGAGAT ACGCGCCTCG GCGGTTGGTG CCGTGATGTC TTTCAGCCGT
ATAGGCACTA TCGTCTCCAC CTATGGCTTA CCACTGTTTA TGGCGACCTA TGGCATCTCG
GCTACCCTGC TAGTTGGCGC GGCGATCTCC CTGCTTGGGC TACTGGTTTC CATCTTTATG
GCGCCGGAAA CCAAGGGGCT GACACTGGAG ACCACCAGCT CGGTGGACTT TGAGTAG
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| Protein sequence | MKSKKSFDDL EFTPLHKKIM LWGSGGPFLD GYVLVIIGLA LQQLTPALEL DAQWIGLVGA
ATLVGLFIGT ALFGYVADLF GRKLMFMIDI IAIAVLSFAT MFISSPIELV ILRFLIGIVI
GADYPIATSM VAEFSPTKQR AFTMGFIAAM WYVGATAANM VGYLLYDVTD GWRWMFGSAI
IPCLVILLGR FHLPESPRWL LKKGRIEECK QVMHQFFGKD ISLNFETAEQ TKYSKLFEAV
YLKRILFVGI IWTCQVIPMF AIYTFGPEII ELLGFTDGKD AALGNIVISI FFMAGCIPAM
YWLNSIGRRP LLIGSFAIMT AALAVLGIVD TPSICLIVAA FAIYAFFSGG PGILQWLYPN
ELFPTEIRAS AVGAVMSFSR IGTIVSTYGL PLFMATYGIS ATLLVGAAIS LLGLLVSIFM
APETKGLTLE TTSSVDFE
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