| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2672 |
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| Symbol | |
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| ID | 4923125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3162660 |
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| End bp | 3163445 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164267 |
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| Product | carnitinyl-CoA dehydratase |
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| Protein accession | YP_001094797 |
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| Protein GI | 127513600 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.539378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT CATTACACGT GACCCGTAAT GGCAGCATCT TAGAGATCGT TTTAGACCGA
CCTAAGGCCA ATGCCATCGA TGCAAAAACC AGTTACGAGA TGGGAGAAGT CTTCTTGGCA
TTTCGTGACG ATCCCGAGCT AAGGGTCGCC ATCATTACCG GTGCCGGTGC GCGTTTCTTC
TCTGCGGGTT GGGATCTCAA GGCGGCGGCA GAGGGAGAGG CACCAGATGC AGACTTCGGC
CCGGGCGGCT TTGCCGGTTT GACCGAACTG TTCGATCTCG ACAAGCCGGT GATCGCCGCG
GTCAATGGCT ATGCCTTCGG TGGCGGTTTC GAGCTTGCTC TGGCGGCTGA TCTGATTGTG
TGCGCCGACA ACGCTAGCTT CGCGCTGCCA GAGGCCAAGT TAGGCATAGT GCCAGACAGC
GGCGGTATGC TGCGCCTGCC TAAGTTGCTG CCAGCCCCTA TCGTTAACGA GTTGATGATG
ACGGGCCGCA GCATGGACGC CCAGGAGGCA TTGCGCTGGG GTGTGGTCAA CCGTGTGGTT
GAGCAAGAAG CACTGATGGA GACGGCTCGT GAGTTGGCAA ACGAGATCAG CCAGAGCGCA
CCACTTGCCC TGGCGGCCAT CAAGGAGATC TATCGCGAGA CCGGCGAGCT GTCTGTCGAG
CAAGGCTATG CCCATATCCG TGGCGGACAG CTGAAGCACT ATCCAAGCGT GCTGCACTCT
GAAGATGCGC TGGAAGGTCC GGCGGCCTTT GCCGAGAAAC GCGATCCTGT GTGGCAAGGC
AAGTAA
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| Protein sequence | MSESLHVTRN GSILEIVLDR PKANAIDAKT SYEMGEVFLA FRDDPELRVA IITGAGARFF
SAGWDLKAAA EGEAPDADFG PGGFAGLTEL FDLDKPVIAA VNGYAFGGGF ELALAADLIV
CADNASFALP EAKLGIVPDS GGMLRLPKLL PAPIVNELMM TGRSMDAQEA LRWGVVNRVV
EQEALMETAR ELANEISQSA PLALAAIKEI YRETGELSVE QGYAHIRGGQ LKHYPSVLHS
EDALEGPAAF AEKRDPVWQG K
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