| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2658 |
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| Symbol | |
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| ID | 4923310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3132095 |
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| End bp | 3132778 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164253 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001094783 |
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| Protein GI | 127513586 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAG CGATTCAAGC ATTGACTAAG ATCTATAACC CCGAGAGTGA CTTTCCGGTG
GCGGCGGTAA AGTCTCTGGA CCTCACCATA GCCCAGGGCG AGTTTGTCGC CATCATGGGC
CCCTCGGGCT CAGGCAAGAC CACGCTGCTG AACATGATCG GTGGCATCGA CAGTCCGAGT
AGCGGCGCCG TATTTATCGA CGGTGAGGAT ATCACCCACC TGAGCGAGCA GGCGCTAATC
GCCTTTCGCC GCGACCATGT GGGCTTTATC TTTCAGGACT ATAGCCTGCT GCCCGTGCTG
ACGGCGCTGG AGAATGTCGA GTTTGTCATG CAGCTGCAGG GCCACAGCGA GGCCGAGTGT
CGTGATCGGG CCATGGCGCT GCTCGCCCAG GTGGGGCTGG CAGCTCAGCA GGATAAGATC
CCCGCCAAGT TGTCGGGCGG GCAACAGCAG AGGGTAGCGG TTGCAAGGGC TCTGGCCCCC
AGACCGAGGT TTGTGATGGC CGATGAGCCC ACGGCCAACC TGGATGCTAA GAGCACCGCC
GAGCTGCTGG ATATCATGCA GTCGCTCAAT GAGCAGGAGG GCACGACTTT TATCTTTTCG
ACCCATGACC CCAGGGTGAT CGCCAGGGCC AAGCGGGTGA TCGTTTTCGA GGATGGTCGC
CTGGTCGAGG ATCGCCGTCA ATGA
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| Protein sequence | MTIAIQALTK IYNPESDFPV AAVKSLDLTI AQGEFVAIMG PSGSGKTTLL NMIGGIDSPS
SGAVFIDGED ITHLSEQALI AFRRDHVGFI FQDYSLLPVL TALENVEFVM QLQGHSEAEC
RDRAMALLAQ VGLAAQQDKI PAKLSGGQQQ RVAVARALAP RPRFVMADEP TANLDAKSTA
ELLDIMQSLN EQEGTTFIFS THDPRVIARA KRVIVFEDGR LVEDRRQ
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